Gene: Potri.009G150100

General Information

Structural Information

  • Species Populus trichocarpa
  • Gene Identifier Potri.009G150100
  • Transcript Identifier Potri.009G150100.1
  • Gene Type Coding gene
  • Location Chr09 : 11855218-11859228 : negative

Gene Family Information

  • ID HOM05D000327
  • #Genes/#Species 1418/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Potri.009G150100.v4.1
  • pacid 42771356
  • synonym POPTR_0009s15220

Descriptions

  • Description PTHR11685//PTHR11685:SF107 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING // C3H4 TYPE ZINC FINGER PROTEIN-RELATED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
InterProprotein ubiquitination
GO:0140547
ISO
PLAZA Integrative Orthologyacquisition of seed longevity AT2G26130
GO:0000209
ISO
PLAZA Integrative Orthologyprotein polyubiquitination AT2G26130
GO:0010431
ISO
PLAZA Integrative Orthologyseed maturation AT2G26130
GO:0006511
ISO
PLAZA Integrative Orthologyubiquitin-dependent protein catabolic process AT2G26130
GO:0009788
ISO
PLAZA Integrative Orthologynegative regulation of abscisic acid-activated signaling pathway AT2G26130
GO:0010476
ISO
PLAZA Integrative Orthologygibberellin mediated signaling pathway AT2G26130

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0004523
IEA
InterProRNA-DNA hybrid ribonuclease activity
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0061630
ISO
PLAZA Integrative Orthologyubiquitin protein ligase activity AT2G21420
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G21420

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G21420
GO:0009705
ISO
PLAZA Integrative Orthologyplant-type vacuole membrane AT2G26130
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT2G26130

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002156 Ribonuclease H domain
IPR036397 Ribonuclease H superfamily
IPR002867 IBR domain
IPR031127 E3 ubiquitin ligase RBR family
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
19.2.2.1.4.4.4 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RBR-type E3 ligase activities.plant-specific E3 ubiquitin ligase (RSL/RFA)