Gene: Potri.009G018600
General Information
Structural Information
- Species Populus trichocarpa
- Gene Identifier Potri.009G018600
- Transcript Identifier Potri.009G018600.1
- Gene Type Coding gene
- Location Chr09 : 3086086-3087677 : positive
Gene Family Information
- ID HOM05D001045
- #Genes/#Species 581/100
- Phylogenetic origin
- ID ORTHO05D001542
- #Genes/#Species 392/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Potri.009G018600.v4.1
- pacid 42770753
- synonym POPTR_0009s02370
Descriptions
- Description PTHR11595//PTHR11595:SF24 - ELONGATION FACTOR 1-BETA // ELONGATION FACTOR 1-BETA 1-RELATED
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006414 | IEA | InterPro | translational elongation | |
| GO:0009808 | ISO | PLAZA Integrative Orthology | lignin metabolic process | AT1G30230 |
| GO:2001006 | ISO | PLAZA Integrative Orthology | regulation of cellulose biosynthetic process | AT1G30230 |
| GO:0042742 | ISO | PLAZA Integrative Orthology | defense response to bacterium | AT5G19510 |
| GO:0071668 | ISO | PLAZA Integrative Orthology | plant-type cell wall assembly | AT1G30230 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003746 | IEA | InterPro | translation elongation factor activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT5G19510 |
| GO:0048046 | ISO | PLAZA Integrative Orthology | apoplast | AT5G19510 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT5G19510 |
| GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT5G19510 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT1G30230 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR014717 | Translation elongation factor EF1B/ribosomal protein S6 |
| IPR036219 | Translation elongation factor eEF-1beta-like superfamily |
| IPR014038 | Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domain |
| IPR036282 | Glutathione S-transferase, C-terminal domain superfamily |
| Mapman id | Description |
|---|---|
| 17.5.1.2.1 | Protein biosynthesis.translation elongation.eEF1 aminoacyl-tRNA binding factor activity.eEF1B eEF1A-GDP-recycling complex.component eEF1B-beta/-delta |