Gene: Potri.008G029300
General Information
Structural Information
- Species Populus trichocarpa
- Gene Identifier Potri.008G029300
- Transcript Identifier Potri.008G029300.1
- Gene Type Coding gene
- Location Chr08 : 1556806-1562433 : positive
Gene Family Information
- ID HOM05D000992
- #Genes/#Species 608/99
- Phylogenetic origin
- ID ORTHO05D006704
- #Genes/#Species 139/94
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- id Potri.008G029300.v4.1
- pacid 42808520
- synonym POPTR_0008s02930
Descriptions
- Description PTHR10343//PTHR10343:SF58 - 5'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNIT // PHOSPHOGLUCAN PHOSPHATASE DSP4, CHLOROPLASTIC
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016311 | IEA | InterPro | dephosphorylation | |
| GO:0005982 | IEA | InterPro | starch metabolic process | |
| GO:0007623 | IEA | InterPro | circadian rhythm | |
| GO:0006470 | IEA | InterPro | protein dephosphorylation | |
| GO:0005983 | ISO | PLAZA Integrative Orthology | starch catabolic process | AT3G52180 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008138 | IEA | InterPro | protein tyrosine/serine/threonine phosphatase activity | |
| GO:0019203 | IEA | InterPro | carbohydrate phosphatase activity | |
| GO:2001066 | ISO | PLAZA Integrative Orthology | amylopectin binding | AT3G52180 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G52180 |
| GO:0030247 | ISO | PLAZA Integrative Orthology | polysaccharide binding | AT3G52180 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT3G52180 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT3G52180 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000340 | Dual specificity phosphatase, catalytic domain |
| IPR030079 | Phosphoglucan phosphatase DSP4 |
| IPR020422 | Dual specificity protein phosphatase domain |
| IPR029021 | Protein-tyrosine phosphatase-like |
| IPR013783 | Immunoglobulin-like fold |
| IPR014756 | Immunoglobulin E-set |
| IPR032640 | AMP-activated protein kinase, glycogen-binding domain |
| Mapman id | Description |
|---|---|
| 3.2.3.2.1 | Carbohydrate metabolism.starch metabolism.degradation.dephosphorylation.phosphoglucan phosphatase (SEX4) |