Gene: Potri.006G208100

General Information

Structural Information

  • Species Populus trichocarpa
  • Gene Identifier Potri.006G208100
  • Transcript Identifier Potri.006G208100.5
  • Gene Type Coding gene
  • Location Chr06 : 21611529-21614407 : positive

Gene Family Information

  • ID HOM05D000466
  • #Genes/#Species 1131/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Potri.006G208100.v4.1
  • pacid 42766904
  • synonym POPTR_0006s22460

Descriptions

  • Description PTHR31140//PTHR31140:SF2 - FAMILY NOT NAMED // B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR VAL3
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT2G36080
GO:0019760
ISO
PLAZA Integrative Orthologyglucosinolate metabolic process AT3G11580
GO:0010073
ISO
PLAZA Integrative Orthologymeristem maintenance AT5G06250
GO:0048366
ISO
PLAZA Integrative Orthologyleaf development AT5G06250
GO:0080167
ISO
PLAZA Integrative Orthologyresponse to karrikin AT2G36080
GO:0010358
ISO
PLAZA Integrative Orthologyleaf shaping AT5G06250
GO:0080113
ISO
PLAZA Integrative Orthologyregulation of seed growth AT3G11580
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT5G06250

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT2G36080
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT3G11580

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G11580

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003340 B3 DNA binding domain
IPR015300 DNA-binding pseudobarrel domain superfamily
IPR044800 B3 domain-containing transcription factor LEC2-like
Mapman id Description
15.5.5.3 RNA biosynthesis.transcriptional regulation.B3 transcription factor superfamily.transcription factor (RAV/NGATHA)