Gene: Potri.005G168500
General Information
Structural Information
- Species Populus trichocarpa
- Gene Identifier Potri.005G168500
- Transcript Identifier Potri.005G168500.1
- Gene Type Coding gene
- Location Chr05 : 16939080-16945625 : positive
Gene Family Information
- ID HOM05D000446
- #Genes/#Species 1165/97
- Phylogenetic origin
- ID ORTHO05D000321
- #Genes/#Species 1120/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- id Potri.005G168500.v4.1
- pacid 42805593
- synonym POPTR_0005s16670
Descriptions
- Description PTHR30620:SF8 - BETA-D-XYLOSIDASE 7-RELATED
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005975 | IEA | InterPro | carbohydrate metabolic process | |
| GO:0045493 | IEA | InterPro | xylan catabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004553 | IEA | InterPro | hydrolase activity, hydrolyzing O-glycosyl compounds | |
| GO:0009044 | IEA | InterPro | xylan 1,4-beta-xylosidase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005774 | ISO | PLAZA Integrative Orthology | vacuolar membrane | AT5G10560 |
| GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT5G10560 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036881 | Glycoside hydrolase family 3 C-terminal domain superfamily |
| IPR044993 | Beta-D-xylosidase |
| IPR036962 | Glycoside hydrolase, family 3, N-terminal domain superfamily |
| IPR001764 | Glycoside hydrolase, family 3, N-terminal |
| IPR026891 | Fibronectin type III-like domain |
| IPR017853 | Glycoside hydrolase superfamily |
| IPR013783 | Immunoglobulin-like fold |
| IPR002772 | Glycoside hydrolase family 3 C-terminal domain |
| Mapman id | Description |
|---|---|
| 21.3.2.2.4.2 | Cell wall organisation.pectin.rhamnogalacturonan I.modification and degradation.alpha-L-arabinofuranosidase activities.bifunctional alpha-L-arabinofuranosidase and beta-D-xylosidase (BXL) |