Gene: PGSC0003DMG401013636

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG401013636
  • Transcript Identifier PGSC0003DMT400035474
  • Gene Type Coding gene
  • Location ST4.03ch02 : 37966827-37973066 : positive

Gene Family Information

  • ID HOM05D001545
  • #Genes/#Species 413/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37427266
  • id PGSC0003DMG401013636.v4.03
  • uniprot M1B2B6

Descriptions

  • Description Protein transport protein Sec24
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006979
ISO
PLAZA Integrative Orthologyresponse to oxidative stress AT3G44340
GO:0032876
IEA
GOA Databasenegative regulation of DNA endoreduplication
GO:0008361
IEA
GOA Databaseregulation of cell size
GO:0007030
IEA
GOA DatabaseGolgi organization
GO:0007029
IEA
GOA Databaseendoplasmic reticulum organization
GO:0048232
IEA
GOA Databasemale gamete generation
GO:0080119
IEA
GOA DatabaseER body organization
GO:0006886
IEA
GOA Databaseintracellular protein transport
GO:0006886
IEA
InterProintracellular protein transport
GO:0090110
IBA
GOA DatabaseCOPII-coated vesicle cargo loading
GO:0006888
IEA
GOA Databaseendoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006888
IEA
InterProendoplasmic reticulum to Golgi vesicle-mediated transport
GO:0015031
IEA
GOA Databaseprotein transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000149
IBA
GOA DatabaseSNARE binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G07100
GO:0008270
IBA
IEA
GOA Databasezinc ion binding
GO:0008270
IEA
InterProzinc ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G44340
GO:0070971
IBA
GOA Databaseendoplasmic reticulum exit site
GO:0030127
IBA
IEA
GOA DatabaseCOPII vesicle coat
GO:0030127
IEA
InterProCOPII vesicle coat

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR041742 Sec24-like, trunk domain
IPR012990 Sec23/Sec24 beta-sandwich
IPR029006 ADF-H/Gelsolin-like domain superfamily
IPR007123 Gelsolin-like domain
IPR006896 Sec23/Sec24, trunk domain
IPR036175 Sec23/Sec24 helical domain superfamily
IPR036465 von Willebrand factor A-like domain superfamily
IPR036174 Zinc finger, Sec23/Sec24-type superfamily
IPR036180 Gelsolin-like domain superfamily
IPR006900 Sec23/Sec24, helical domain
IPR006895 Zinc finger, Sec23/Sec24-type
Mapman id Description
22.1.1.1.3.2 Vesicle trafficking.ER export trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec23/24 cargo adaptor subcomplex.component Sec24