Gene: PGSC0003DMG400038720

General Information

Structural Information

Species Solanum tuberosum
Gene Identifier PGSC0003DMG400038720
Transcript Identifier PGSC0003DMT400089149
Gene Type Coding gene
Location ST4.03ch07 : 54308339-54309712 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000218
#Genes/#Species 1867/96
Phylogenetic origin

ID ORTHO05D000125
#Genes/#Species 1823/96
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

pacid 37431014
id PGSC0003DMG400038720.v4.03
uniprot M1DHJ4

Descriptions

Short descriptions
Ortholog descriptions

Description Polyubiquitin

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0016567	IBA	GOA Database	protein ubiquitination
GO:0019941	IBA	GOA Database	modification-dependent protein catabolic process
GO:0006464	ISO	PLAZA Integrative Orthology	cellular protein modification process	AT4G05320
GO:0009751	ISO	PLAZA Integrative Orthology	response to salicylic acid	AT4G05320
GO:0007568	ISO	PLAZA Integrative Orthology	aging	AT4G05320

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding
GO:0031625	IBA	GOA Database	ubiquitin protein ligase binding
GO:0031386	IBA	GOA Database	protein tag
GO:0003729	ISO	PLAZA Integrative Orthology	mRNA binding	AT4G05050

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005737	IBA	GOA Database	cytoplasm
GO:0005634	IBA	GOA Database	nucleus
GO:0005773	ISO	PLAZA Integrative Orthology	vacuole	AT4G02890
GO:0005622	ISO	PLAZA Integrative Orthology	intracellular anatomical structure	AT4G05050

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR029071	Ubiquitin-like domain superfamily
IPR019956	Ubiquitin domain
IPR000626	Ubiquitin-like domain

Mapman id	Description
19.2.2.1.1	Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-fold protein (UBQ)