Gene: AT4G05050

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G05050
  • Transcript Identifier AT4G05050.1
  • Gene Type Coding gene
  • Location Chr4 : 2588271-2588960 : negative

Gene Family Information

  • ID HOM05D000218
  • #Genes/#Species 1867/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G05050.1
  • symbol UBQ11
  • uniprot P0CH33

Descriptions

  • Description ubiquitin 11
  • Computational description ubiquitin 11 (UBQ11); CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: polyubiquitin 10 (TAIR:AT4G05320.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006511
ISS
Gene Ontologyubiquitin-dependent protein catabolic process1
GO:0016567
IBA
Gene Ontologyprotein ubiquitination2
GO:0019941
IBA
Gene Ontologymodification-dependent protein catabolic process2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
IDA
Gene OntologymRNA binding3
GO:0031625
IBA
Gene Ontologyubiquitin protein ligase binding2
GO:0031386
IBA
Gene Ontologyprotein tag2
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005622
TAS
Gene Ontologyintracellular anatomical structure
GO:0005829
HDA
Gene Ontologycytosol4
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IBA
Gene Ontologynucleus2
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IBA
Gene Ontologycytoplasm2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000626 Ubiquitin-like domain
IPR019956 Ubiquitin domain
IPR029071 Ubiquitin-like domain superfamily
Mapman id Description
19.2.2.1.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-fold protein (UBQ)