Gene: PGSC0003DMG400011663

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400011663
  • Transcript Identifier PGSC0003DMT400030453
  • Gene Type Coding gene
  • Location ST4.03ch08 : 25466171-25469339 : negative

Gene Family Information

  • ID HOM05D006705
  • #Genes/#Species 120/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37470378
  • id PGSC0003DMG400011663.v4.03
  • uniprot M1AUA1

Descriptions

  • Description Pentatricopeptide repeat-containing protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009658
IEA
GOA Databasechloroplast organization
GO:0010239
IEA
GOA Databasechloroplast mRNA processing
GO:0045727
ISO
PLAZA Integrative Orthologypositive regulation of translation Zm00001eb323580

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003727
IEA
GOA Databasesingle-stranded RNA binding
GO:0003729
IEA
GOA DatabasemRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042644
IEA
GOA Databasechloroplast nucleoid
GO:0042651
IEA
GOA Databasethylakoid membrane
GO:0009570
IEA
GOA Databasechloroplast stroma
GO:0009507
IEA
GOA Databasechloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR002885 Pentatricopeptide repeat
IPR033443 Pentacotripeptide-repeat region of PRORP
Mapman id Description
16.11.5.2 RNA processing.organelle machinery.post-transcriptional gene expression regulation.plastidial mRNA processing factor (CRP1)