Gene: PGSC0003DMG400010998
General Information
Structural Information
- Species Solanum tuberosum
- Gene Identifier PGSC0003DMG400010998
- Transcript Identifier PGSC0003DMT400028567
- Gene Type Coding gene
- Location ST4.03ch10 : 54474094-54476335 : negative
Gene Family Information
- ID HOM05D000368
- #Genes/#Species 1307/100
- Phylogenetic origin
- ID ORTHO05D000289
- #Genes/#Species 1191/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- pacid 37477499
- id PGSC0003DMG400010998.v4.03
- uniprot M1ARB2
Descriptions
- Description Actin depolymerizing factor
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006979 | ISO | PLAZA Integrative Orthology | response to oxidative stress | AT5G59880 |
| GO:0042742 | ISO | PLAZA Integrative Orthology | defense response to bacterium | AT5G59890 |
| GO:0046686 | ISO | PLAZA Integrative Orthology | response to cadmium ion | AT5G59880 |
| GO:0002758 | ISO | PLAZA Integrative Orthology | innate immune response-activating signal transduction | AT5G59890 |
| GO:0030042 | IBA IEA | GOA Database | actin filament depolymerization | |
| GO:0030042 | IEA | InterPro | actin filament depolymerization |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G59880 |
| GO:0003779 | IEA | GOA Database | actin binding | |
| GO:0003779 | IEA | InterPro | actin binding | |
| GO:0051015 | IBA | GOA Database | actin filament binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT5G59880 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT5G59880 |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT5G59880 |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT5G59880 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT5G59880 |
| GO:0015629 | IBA IEA | GOA Database | actin cytoskeleton | |
| GO:0015629 | IEA | InterPro | actin cytoskeleton | |
| GO:0005737 | IBA | GOA Database | cytoplasm |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 20.2.2.8 | Cytoskeleton organisation.microfilament network.actin polymerisation.actin-depolymerizing factor (ADF) |