Gene: PGSC0003DMG400000954
General Information
Structural Information
- Species Solanum tuberosum
- Gene Identifier PGSC0003DMG400000954
- Transcript Identifier PGSC0003DMT400002502
- Gene Type Coding gene
- Location ST4.03ch09 : 46684949-46687585 : negative
Gene Family Information
- ID HOM05D001026
- #Genes/#Species 592/100
- Phylogenetic origin
- ID ORTHO05D007776
- #Genes/#Species 127/94
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- pacid 37456324
- id PGSC0003DMG400000954.v4.03
- uniprot M0ZK80
Descriptions
- Description Isoamylase isoform 2
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005975 | IEA | GOA Database | carbohydrate metabolic process | |
| GO:0005975 | IEA | InterPro | carbohydrate metabolic process | |
| GO:0005983 | ISO | PLAZA Integrative Orthology | starch catabolic process | AT4G09020 |
| GO:0010021 | IEA | GOA Database | amylopectin biosynthetic process | |
| GO:0019252 | IEA | GOA Database | starch biosynthetic process | |
| GO:0019252 | IEA | InterPro | starch biosynthetic process | |
| GO:0005977 | IEA | GOA Database | glycogen metabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0019156 | IEA | GOA Database | isoamylase activity | |
| GO:0019156 | IEA | InterPro | isoamylase activity | |
| GO:0003824 | IEA | GOA Database | catalytic activity | |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0004553 | IEA | GOA Database | hydrolase activity, hydrolyzing O-glycosyl compounds | |
| GO:0004553 | IEA | InterPro | hydrolase activity, hydrolyzing O-glycosyl compounds |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009569 | ISO | PLAZA Integrative Orthology | chloroplast starch grain | AT4G09020 |
| GO:0043033 | ISO | PLAZA Integrative Orthology | isoamylase complex | Os05g0393700 |
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT4G09020 |
| GO:0009507 | IEA | GOA Database | chloroplast |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR044505 | Glycogen debranching enzyme GlgX/isoamylase, N-terminal Early set domain |
| IPR014756 | Immunoglobulin E-set |
| IPR006047 | Glycosyl hydrolase, family 13, catalytic domain |
| IPR013783 | Immunoglobulin-like fold |
| IPR013780 | Glycosyl hydrolase, all-beta |
| IPR017853 | Glycoside hydrolase superfamily |
| IPR004193 | Glycoside hydrolase, family 13, N-terminal |
| IPR044096 | Isoamylase 2, catalytic domain |
| Mapman id | Description |
|---|---|
| 3.2.2.6.2 | Carbohydrate metabolism.starch metabolism.biosynthesis.ISA1-ISA2 isoamylase-type starch debranching complex.component ISA2 |