Gene: PGR142G2746
General Information
Structural Information
- Species Punica granatum
- Gene Identifier PGR142G2746
- Transcript Identifier PGR142G2746.01
- Gene Type Coding gene
- Location NC_045128.1 : 38236505-38239514 : positive
Gene Family Information
- ID HOM05D000446
- #Genes/#Species 1165/97
- Phylogenetic origin
- ID ORTHO05D000321
- #Genes/#Species 1120/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- pid XP_031379617.1
- name LOC116194853
- name XM_031523757.1
- id gene-LOC116194853
- uniprot A0A218X372
Descriptions
- product probable beta-D-xylosidase 5
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005975 | IEA | GOA Database | carbohydrate metabolic process | |
| GO:0005975 | IEA | InterPro | carbohydrate metabolic process | |
| GO:0045493 | IEA | GOA Database | xylan catabolic process | |
| GO:0045493 | IEA | InterPro | xylan catabolic process | |
| GO:0008152 | IEA | GOA Database | metabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004553 | IEA | GOA Database | hydrolase activity, hydrolyzing O-glycosyl compounds | |
| GO:0004553 | IEA | InterPro | hydrolase activity, hydrolyzing O-glycosyl compounds | |
| GO:0009044 | IEA | GOA Database | xylan 1,4-beta-xylosidase activity | |
| GO:0009044 | IEA | InterPro | xylan 1,4-beta-xylosidase activity | |
| GO:0016798 | IEA | GOA Database | hydrolase activity, acting on glycosyl bonds | |
| GO:0016787 | IEA | GOA Database | hydrolase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005576 | IEA | GOA Database | extracellular region | |
| GO:0005618 | ISO | PLAZA Integrative Orthology | cell wall | AT3G19620 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036881 | Glycoside hydrolase family 3 C-terminal domain superfamily |
| IPR001764 | Glycoside hydrolase, family 3, N-terminal |
| IPR026891 | Fibronectin type III-like domain |
| IPR017853 | Glycoside hydrolase superfamily |
| IPR002772 | Glycoside hydrolase family 3 C-terminal domain |
| IPR013783 | Immunoglobulin-like fold |
| IPR044993 | Beta-D-xylosidase |
| IPR036962 | Glycoside hydrolase, family 3, N-terminal domain superfamily |
| Mapman id | Description |
|---|---|
| 21.3.2.2.4.2 | Cell wall organisation.pectin.rhamnogalacturonan I.modification and degradation.alpha-L-arabinofuranosidase activities.bifunctional alpha-L-arabinofuranosidase and beta-D-xylosidase (BXL) |