Gene: PGR142G1700

General Information

Structural Information

  • Species Punica granatum
  • Gene Identifier PGR142G1700
  • Transcript Identifier PGR142G1700.01
  • Gene Type Coding gene
  • Location NC_045128.1 : 28158791-28160218 : positive

Gene Family Information

  • ID HOM05D001910
  • #Genes/#Species 344/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pid XP_031380585.1
  • name LOC116195493
  • name XM_031524725.1
  • id gene-LOC116195493
  • uniprot A0A218Y1B9

Descriptions

  • product thioredoxin-like protein YLS8, transcript variant X1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IEA
GOA DatabasemRNA splicing, via spliceosome
GO:0000398
IEA
InterPromRNA splicing, via spliceosome
GO:0006397
IEA
GOA DatabasemRNA processing
GO:0008380
IEA
GOA DatabaseRNA splicing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G08290

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046540
IEA
GOA DatabaseU4/U6 x U5 tri-snRNP complex
GO:0046540
IEA
InterProU4/U6 x U5 tri-snRNP complex
GO:0005682
IEA
GOA DatabaseU5 snRNP
GO:0005634
IEA
GOA Databasenucleus
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G08290

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004123 Dim1 family
IPR036249 Thioredoxin-like superfamily
Mapman id Description
16.2.1.4.1 RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U5 small nuclear ribonucleoprotein particle (snRNP).protein factor (U5-15kDa/YLS8)