Gene: PGR142G0028
General Information
Structural Information
- Species Punica granatum
- Gene Identifier PGR142G0028
- Transcript Identifier PGR142G0028.02
- Gene Type Coding gene
- Location NC_045128.1 : 29197519-29202170 : positive
Gene Family Information
- ID HOM05D000495
- #Genes/#Species 1074/96
- Phylogenetic origin
- ID ORTHO05D000357
- #Genes/#Species 1061/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- pid XP_031381239.1
- name LOC116195940
- name XM_031525379.1
- id gene-LOC116195940
- uniprot A0A6P8CE01
Descriptions
- product beta-glucosidase BoGH3B-like, transcript variant X2
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005975 | IEA | GOA Database | carbohydrate metabolic process | |
| GO:0005975 | IEA | InterPro | carbohydrate metabolic process | |
| GO:0008152 | IEA | GOA Database | metabolic process | |
| GO:0009969 | ISO | PLAZA Integrative Orthology | xyloglucan biosynthetic process | AT5G04885 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004553 | IEA | GOA Database | hydrolase activity, hydrolyzing O-glycosyl compounds | |
| GO:0004553 | IEA | InterPro | hydrolase activity, hydrolyzing O-glycosyl compounds | |
| GO:0016798 | IEA | GOA Database | hydrolase activity, acting on glycosyl bonds | |
| GO:0016787 | IEA | GOA Database | hydrolase activity | |
| GO:0009044 | ISO | PLAZA Integrative Orthology | xylan 1,4-beta-xylosidase activity | AT3G62710 |
| GO:0008422 | ISO | PLAZA Integrative Orthology | beta-glucosidase activity | AT5G04885 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0005576 | IEA | GOA Database | extracellular region | |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT5G04885 |
| GO:0031225 | ISO | PLAZA Integrative Orthology | anchored component of membrane | AT5G04885 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036881 | Glycoside hydrolase family 3 C-terminal domain superfamily |
| IPR017853 | Glycoside hydrolase superfamily |
| IPR002772 | Glycoside hydrolase family 3 C-terminal domain |
| IPR036962 | Glycoside hydrolase, family 3, N-terminal domain superfamily |
| IPR001764 | Glycoside hydrolase, family 3, N-terminal |
| Mapman id | Description |
|---|---|
| 50.3.2 | Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase |