Gene: PGR119G2172
General Information
Structural Information
- Species Punica granatum
- Gene Identifier PGR119G2172
- Transcript Identifier PGR119G2172.01
- Gene Type Coding gene
- Location NC_045132.1 : 8293762-8299552 : positive
Gene Family Information
- ID HOM05D003829
- #Genes/#Species 181/97
- Phylogenetic origin
- ID ORTHO05D004943
- #Genes/#Species 167/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- pid XP_031401908.1
- name LOC116211598
- name XM_031546048.1
- id gene-LOC116211598
- uniprot A0A6P8E9L8
Descriptions
- product phenylalanine--tRNA ligase beta subunit, cytoplasmic
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006432 | IEA | GOA Database | phenylalanyl-tRNA aminoacylation | |
| GO:0006432 | IEA | InterPro | phenylalanyl-tRNA aminoacylation | |
| GO:0006412 | IEA | GOA Database | translation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016874 | IEA | GOA Database | ligase activity | |
| GO:0000287 | IEA | GOA Database | magnesium ion binding | |
| GO:0000287 | IEA | InterPro | magnesium ion binding | |
| GO:0003723 | IEA | GOA Database | RNA binding | |
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0004812 | IEA | GOA Database | aminoacyl-tRNA ligase activity | |
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0000166 | IEA | InterPro | nucleotide binding | |
| GO:0004826 | IEA | GOA Database | phenylalanine-tRNA ligase activity | |
| GO:0004826 | IEA | InterPro | phenylalanine-tRNA ligase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G72550 |
| GO:0005737 | IEA | GOA Database | cytoplasm | |
| GO:0005737 | IEA | InterPro | cytoplasm |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR041616 | Phenylalanyl tRNA synthetase beta chain, core domain |
| IPR005146 | B3/B4 tRNA-binding domain |
| IPR005147 | tRNA synthetase, B5-domain |
| IPR040659 | Phenylalanine--tRNA ligase beta subunit, B1 domain |
| IPR004531 | Phenylalanyl-tRNA synthetase, class IIc, beta subunit, archael/eukaryotic type |
| IPR045060 | Phenylalanine-tRNA ligase, class IIc, beta subunit |
| IPR009061 | Putative DNA-binding domain superfamily |
| IPR020825 | Phenylalanyl-tRNA synthetase-like, B3/B4 |
| Mapman id | Description |
|---|---|
| 17.2.16.2 | Protein biosynthesis.aminoacyl-tRNA synthetase activities.phenylalanine-tRNA ligase heterodimer.subunit beta |