Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR119G2172 Punica granatum HOM05D003829 ORTHO05D004943 0.0e+00 1194.9 598 100.0
GSVIVG01008188001 Vitis vinifera HOM05D003829 ORTHO05D004943 2.7e-290 1001.5 598 81.3
Potri.018G070200 Populus trichocarpa HOM05D003829 ORTHO05D004943 4.3e-288 994.2 598 80.9
Gohir.D12G270700 Gossypium hirsutum HOM05D003829 ORTHO05D004943 4.8e-287 990.7 598 82.1
Gohir.A12G270300 Gossypium hirsutum HOM05D003829 ORTHO05D004943 6.9e-286 986.9 598 81.6
Gorai.008G291100 Gossypium raimondii HOM05D003829 ORTHO05D004943 6.9e-286 986.9 598 81.8
Eucgr.B02012 Eucalyptus grandis HOM05D003829 ORTHO05D004943 7.7e-285 983.4 597 80.7
Atru.chr10.875 Acer truncatum HOM05D003829 ORTHO05D004943 3.8e-284 981.1 598 80.8
Sed0025371 Sechium edule HOM05D003829 ORTHO05D004943 5.0e-284 980.7 598 81.4
CSS0022273 Camellia sinensis var. sinensis HOM05D003829 ORTHO05D004943 1.1e-283 979.5 598 80.1
Nn3g17616 Nelumbo nucifera HOM05D003829 ORTHO05D004943 2.5e-283 978.4 597 79.4
Potri.013G068100 Populus trichocarpa HOM05D003829 ORTHO05D004943 4.2e-283 977.6 598 79.3
Prupe.5G041000 Prunus persica HOM05D003829 ORTHO05D004943 5.5e-283 977.2 598 80.1
Prupe.5G212200 Prunus persica HOM05D003829 ORTHO05D004943 6.1e-282 973.8 598 79.6
Thecc.03G060100 Theobroma cacao HOM05D003829 ORTHO05D004943 6.1e-282 973.8 598 81.1
SGA_v2.0_scaffold116G32207 Striga asiatica HOM05D003829 ORTHO05D004943 1.4e-281 972.6 598 79.6
Cc00_g04570 Coffea canephora HOM05D003829 ORTHO05D004943 5.1e-281 970.7 598 79.6
ClCG06G015260 Citrullus lanatus HOM05D003829 ORTHO05D004943 2.6e-280 968.4 598 80.3
THA.LOC104820955 Tarenaya hassleriana HOM05D003829 ORTHO05D004943 2.6e-280 968.4 597 79.4
Actinidia35063 Actinidia chinensis HOM05D003829 ORTHO05D004943 5.7e-280 967.2 598 79.4
THA.LOC104806554 Tarenaya hassleriana HOM05D003829 ORTHO05D004943 9.7e-280 966.5 597 79.7
Actinidia18960 Actinidia chinensis HOM05D003829 ORTHO05D004943 1.3e-279 966.1 598 79.4
Nn6g34733 Nelumbo nucifera HOM05D003829 ORTHO05D004943 2.2e-279 965.3 595 79.7
SGA_v2.0_scaffold127G34045 Striga asiatica HOM05D003829 ORTHO05D004943 3.7e-279 964.5 598 78.8
CsaV3_1G003150 Cucumis sativus L. HOM05D003829 ORTHO05D004943 1.1e-278 963.0 598 79.4
Ciclev10014690m.g Citrus clementina HOM05D003829 ORTHO05D004943 1.4e-278 962.6 598 78.8
Manes.06G055300 Manihot esculenta HOM05D003829 ORTHO05D004943 2.4e-278 961.8 599 79.3
TAR622G1091 Trochodendron aralioides HOM05D003829 ORTHO05D004943 9.1e-278 959.9 613 77.5
MSTRG.22458 Avicennia marina HOM05D003829 ORTHO05D004943 1.5e-277 959.1 598 78.6
Hma1.2p1_0744F.1_g211650 Hydrangea macrophylla HOM05D003829 ORTHO05D004943 2.0e-277 958.7 598 78.8
Hund27361 Selenicereus undatus HOM05D003829 ORTHO05D004943 2.0e-277 958.7 620 76.3
AL2G32240 Arabidopsis lyrata HOM05D003829 ORTHO05D004943 5.5e-275 950.7 598 75.9
Sabra13G0059400 Salix brachista HOM05D003829 ORTHO05D004943 2.3e-273 945.3 673 70.7
RcHm_v2.0_Chr7g0184111 Rosa chinensis HOM05D003829 ORTHO05D004943 3.0e-273 944.9 615 75.0
Sp6g28120 Schrenkiella parvula HOM05D003829 ORTHO05D004943 6.7e-273 943.7 599 77.1
arahy.Tifrunner.gnm1.ann1.WM1R7K Arachis hypogaea HOM05D003829 ORTHO05D004943 4.4e-272 941.0 608 76.5
Ah.03g138770 Amaranthus hybridus HOM05D003829 ORTHO05D004943 1.7e-271 939.1 577 77.8
arahy.Tifrunner.gnm1.ann1.03AHKF Arachis hypogaea HOM05D003829 ORTHO05D004943 2.2e-271 938.7 608 76.2
Carub.0002s1941 Capsella rubella HOM05D003829 ORTHO05D004943 2.2e-271 938.7 598 75.4
BolC9t58950H Brassica oleracea HOM05D003829 ORTHO05D004943 2.8e-271 938.3 599 76.3
MD06G1208000 Malus domestica HOM05D003829 ORTHO05D004943 6.3e-271 937.2 604 76.3
AUR62008644 Chenopodium quinoa HOM05D003829 ORTHO05D004943 8.2e-271 936.8 608 74.7
HanXRQChr03g0078721 Helianthus annuus HOM05D003829 ORTHO05D004943 8.2e-271 936.8 598 77.1
EL10Ac6g14132 Beta vulgaris HOM05D003829 ORTHO05D004943 1.1e-270 936.4 625 72.8
Glyma.05G016400 Glycine max HOM05D003829 ORTHO05D004943 1.8e-270 935.6 608 76.8
A10p23060 Brassica napus HOM05D003829 ORTHO05D004943 3.1e-270 934.9 599 76.3
BraA10t44375Z Brassica rapa HOM05D003829 ORTHO05D004943 3.1e-270 934.9 599 76.3
ECA240G3266 Erigeron canadensis HOM05D003829 ORTHO05D003544 7.0e-270 933.7 598 76.8
AUR62014243 Chenopodium quinoa HOM05D003829 ORTHO05D004943 9.1e-270 933.3 608 74.3
C09p61050 Brassica napus HOM05D003829 ORTHO05D004943 1.2e-269 932.9 599 76.1
ATR0789G018 Amborella trichopoda HOM05D003829 ORTHO05D004943 2.0e-269 932.2 601 75.9
FvH4_5g13020 Fragaria vesca HOM05D003829 ORTHO05D004943 1.3e-268 929.5 611 74.6
VMungo1215G2863 Vigna mungo HOM05D003829 ORTHO05D004943 1.3e-268 929.5 608 76.6
Phvul.003G180700 Phaseolus vulgaris HOM05D003829 ORTHO05D004943 2.2e-268 928.7 608 76.3
FAN08G2534 Fragaria x ananassa HOM05D003829 ORTHO05D004943 2.9e-268 928.3 611 74.6
MD14G1218400 Malus domestica HOM05D003829 ORTHO05D004943 2.9e-268 928.3 604 76.0
FAN13G0156 Fragaria x ananassa HOM05D003829 ORTHO05D004943 1.1e-267 926.4 611 74.6
Glyma.17G083700 Glycine max HOM05D003829 ORTHO05D004943 1.5e-267 926.0 608 76.0
FAN18G1085 Fragaria x ananassa HOM05D003829 ORTHO05D004943 2.5e-267 925.2 611 74.3
Lj4C813G7 Lonicera japonica HOM05D003829 ORTHO05D004943 2.5e-267 925.2 576 78.3
SalBow6G2606 Salvia bowleyana HOM05D003829 ORTHO05D004943 2.5e-267 925.2 598 76.1
Psat4g043920 Pisum sativum HOM05D003829 ORTHO05D004943 4.7e-266 921.0 608 75.7
AT1G72550 Arabidopsis thaliana HOM05D003829 ORTHO05D004943 1.4e-265 919.5 605 73.1
HanXRQChr09g0270121 Helianthus annuus HOM05D003829 ORTHO05D004943 4.0e-265 917.9 599 76.0
CiPaw.04G139300 Carya illinoinensis HOM05D003829 ORTHO05D004943 5.2e-265 917.5 609 75.2
Sopen01g003830 Solanum pennellii HOM05D003829 ORTHO05D004943 1.2e-264 916.4 598 75.1
TWI73G0611 Tripterygium wilfordii HOM05D003829 ORTHO05D004943 1.2e-264 916.4 598 75.8
Medtr4g112680 Medicago truncatula HOM05D003829 ORTHO05D004943 2.6e-264 915.2 608 75.0
Sc12g0007010 Simmondsia chinensis HOM05D003829 ORTHO05D004943 1.3e-263 912.9 598 75.3
Lj4g0017423 Lotus japonicus HOM05D003829 ORTHO05D004943 2.4e-262 908.7 608 74.7
QL10p021913 Quercus lobata HOM05D003829 ORTHO05D004943 2.7e-261 905.2 608 74.5
CARHR065490 Cardamine hirsuta HOM05D003829 ORTHO05D004943 3.5e-261 904.8 610 72.5
Lalb_Chr12g0197451 Lupinus albus HOM05D003829 ORTHO05D004943 3.5e-261 904.8 608 73.7
CAN.G282.43 Capsicum annuum HOM05D003829 ORTHO05D004943 7.7e-261 903.7 598 74.1
COL.COLO4_28877 Corchorus olitorius HOM05D003829 ORTHO05D004943 1.5e-259 899.4 630 73.7
DCAR_011621 Daucus carota HOM05D003829 ORTHO05D004943 1.5e-259 899.4 599 74.8
Migut.N03353 Erythranthe guttata HOM05D003829 ORTHO05D004943 4.4e-256 887.9 579 75.0
Cpa.g.sc271.5 Carica papaya HOM05D003829 ORTHO05D004943 7.5e-256 887.1 598 75.6
Solyc01g008310.4 Solanum lycopersicum HOM05D003829 ORTHO05D004943 9.8e-256 886.7 575 75.7
CDE10G0816 Ceratophyllum demersum HOM05D003829 ORTHO05D004943 8.3e-255 883.6 591 73.3
Aa31LG11G13610 Aethionema arabicum HOM05D003829 ORTHO05D004943 1.4e-254 882.9 636 70.4
Migut.M00517 Erythranthe guttata HOM05D003829 ORTHO05D004943 1.8e-254 882.5 598 72.9
Dinv38617 Davidia involucrata HOM05D003829 ORTHO05D004943 7.0e-254 880.6 577 74.9
Migut.O00831 Erythranthe guttata HOM05D003829 ORTHO05D004943 7.7e-253 877.1 598 72.6
Peaxi162Scf00153g00217 Petunia axillaris HOM05D003829 ORTHO05D004943 5.0e-252 874.4 598 72.7
unitig_0.g846 Utricularia gibba HOM05D003829 ORTHO05D004943 2.1e-250 869.0 597 71.4
Thhalv10007156m.g Eutrema salsugineum HOM05D003829 ORTHO05D004943 1.0e-249 866.7 598 71.1
vmacro21052 Vaccinium macrocarpon HOM05D003829 ORTHO05D004943 2.3e-249 865.5 735 62.4
unitig_60.g25860 Utricularia gibba HOM05D003829 ORTHO05D004943 4.0e-249 864.8 611 70.2
BcaC04g18917 Brassica carinata HOM05D003829 ORTHO05D004943 6.8e-249 864.0 599 72.0
CANSAT80G2907 Cannabis sativa HOM05D003829 ORTHO05D004943 4.1e-246 854.7 524 78.4
Nitab4.5_0006274g0010 Nicotiana tabacum HOM05D003829 ORTHO05D004943 6.6e-244 847.4 598 71.7
Duzib084G0834 Durio zibethinus HOM05D003829 ORTHO05D004943 1.8e-241 839.3 598 72.2
Cfa021591 Carpinus fangiana HOM05D003829 ORTHO05D004943 2.9e-239 832.0 588 73.3
Ca_21737_v3 Cicer arietinum L. HOM05D003829 ORTHO05D004943 5.6e-235 817.8 557 73.8
PSO676G0009 Papaver somniferum HOM05D003829 ORTHO05D004943 2.0e-232 809.3 608 66.9
MELO3C017266.2 Cucumis melo HOM05D003829 ORTHO05D004943 4.4e-232 808.1 522 77.4
Mapoly0013s0023 Marchantia polymorpha HOM05D003829 ORTHO05D004943 1.3e-231 806.6 601 67.6
PSO384G2719 Papaver somniferum HOM05D003829 ORTHO05D004943 9.2e-230 800.4 606 66.2
Pp3c22_15340 Physcomitrium patens HOM05D003829 ORTHO05D004943 3.5e-229 798.5 606 66.0
Os05g0558900 Oryza sativa ssp. japonica HOM05D003829 ORTHO05D004943 1.7e-228 796.2 602 66.6
BcaB08g36877 Brassica carinata HOM05D003829 ORTHO05D004943 3.3e-227 792.0 583 68.8
SMO351G0192 Selaginella moellendorffii HOM05D003829 ORTHO05D004943 4.3e-227 791.6 601 65.2
Pp3c19_13120 Physcomitrium patens HOM05D003829 ORTHO05D004943 1.8e-225 786.2 606 65.2
TPR.G23867 Trifolium pratense HOM05D003829 ORTHO05D004943 3.4e-224 781.9 533 72.8
CDE10G0520 Ceratophyllum demersum HOM05D003829 ORTHO05D004943 4.4e-224 781.6 527 72.7
COL.COLO4_30269 Corchorus olitorius HOM05D003829 ORTHO05D004943 3.2e-222 775.4 793 56.1
Aqoxy1G02793 Aquilegia oxysepala HOM05D003829 ORTHO05D004943 5.4e-222 774.6 602 65.3
CiPaw.15G121900 Carya illinoinensis HOM05D003829 ORTHO05D004943 1.2e-221 773.5 526 73.0
Aqoxy6G02137 Aquilegia oxysepala HOM05D003829 ORTHO05D004943 1.7e-220 769.6 602 64.8
Zm00001eb267900 Zea mays HOM05D003829 ORTHO05D004943 8.9e-217 757.3 602 65.0
CBR_g49053 Chara braunii HOM05D003829 ORTHO05D004943 8.7e-212 740.7 602 62.1
Medtr5g077610 Medicago truncatula HOM05D003829 ORTHO05D004943 5.6e-211 738.0 608 63.8
Oeu037756.2 Olea europaea HOM05D003829 ORTHO05D004943 1.3e-204 716.8 491 72.9
Lsat_1_v5_gn_1_11920 Lactuca sativa HOM05D003829 ORTHO05D004943 1.6e-202 709.9 580 62.9
Migut.L00155 Erythranthe guttata HOM05D003829 ORTHO05D004943 2.2e-199 699.5 443 76.1
Cre13.g603900 Chlamydomonas reinhardtii HOM05D003829 ORTHO05D004943 4.0e-193 678.7 617 56.2
AagrBONN_evm.TU.Sc2ySwM_199.43 Anthoceros agrestis HOM05D003829 ORTHO05D004943 5.8e-192 674.9 523 64.4
CiPaw.16G081500 Carya illinoinensis HOM05D003829 ORTHO05D004943 7.6e-184 647.9 429 76.5
PSO339G3234 Papaver somniferum HOM05D003829 ORTHO05D004943 1.1e-182 644.0 579 59.9
MCO09G827 Micromonas commoda HOM05D003829 ORTHO05D004943 2.1e-181 639.8 609 54.8
PRCOL_00001438 Prasinoderma coloniale HOM05D003829 ORTHO05D004943 9.0e-177 624.4 586 54.3
Atru.chr11.247 Acer truncatum HOM05D003829 ORTHO05D004943 1.7e-175 620.2 537 61.6
HPP92_013145 Vanilla planifolia HOM05D003829 ORTHO05D004943 9.1e-169 597.8 611 53.5
Rhsim09G0091000 Rhododendron simsii HOM05D003829 ORTHO05D004943 2.3e-164 583.2 407 71.0
Rhsim01G0138800 Rhododendron simsii HOM05D003829 ORTHO05D004943 2.4e-161 573.2 790 44.9
Hma1.2p1_0340F.1_g130210 Hydrangea macrophylla HOM05D003829 ORTHO05D004943 8.5e-159 564.7 400 72.2
Haze_18554 Corylus avellana HOM05D003829 ORTHO05D004943 2.1e-149 533.5 381 71.7
Haze_26625 Corylus avellana HOM05D003829 ORTHO05D004943 2.1e-149 533.5 611 46.0
Cfa026018 Carpinus fangiana HOM05D003829 ORTHO05D004943 8.0e-149 531.6 604 46.2
Haze_25314 Corylus avellana HOM05D003829 ORTHO05D004943 7.3e-126 455.3 318 73.6
HPP92_013144 Vanilla planifolia HOM05D003829 ORTHO05D004943 1.2e-123 448.0 337 67.4
SEGI_10599 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 3.2e-113 413.3 289 71.6
QL10p029183 Quercus lobata HOM05D003829 ORTHO05D004943 1.2e-112 411.4 259 77.2
Nitab4.5_0001328g0030 Nicotiana tabacum HOM05D003829 ORTHO05D004943 5.2e-108 396.0 597 41.5
HPP92_013183 Vanilla planifolia HOM05D003829 ORTHO05D004943 2.0e-107 394.0 457 48.6
HPP92_012745 Vanilla planifolia HOM05D003829 ORTHO05D004943 4.6e-104 382.9 260 73.5
AagrBONN_evm.TU.Sc2ySwM_368.2791 Anthoceros agrestis HOM05D003829 ORTHO05D004943 6.6e-103 379.0 416 49.5
SEGI_36904 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 5.6e-102 375.9 291 66.3
HPP92_013146 Vanilla planifolia HOM05D003829 ORTHO05D004943 3.8e-90 336.7 307 58.3
Nitab4.5_0000069g0100 Nicotiana tabacum HOM05D003829 ORTHO05D004943 5.4e-89 332.8 257 66.1
HPP92_013143 Vanilla planifolia HOM05D003829 ORTHO05D004943 1.1e-81 308.5 262 59.5
Nitab4.5_0023629g0010 Nicotiana tabacum HOM05D003829 ORTHO05D004943 1.4e-76 291.6 198 73.2
SEGI_15169 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 4.0e-76 290.0 194 73.2
C02p08100 Brassica napus HOM05D003829 ORTHO05D004943 5.5e-73 279.6 203 66.0
Nitab4.5_0021995g0010 Nicotiana tabacum HOM05D003829 ORTHO05D004943 5.5e-73 279.6 190 73.2
BcaC03g18463 Brassica carinata HOM05D003829 ORTHO05D004943 1.8e-68 264.6 204 63.2
Nitab4.5_0023875g0010 Nicotiana tabacum HOM05D003829 ORTHO05D004943 4.1e-68 263.5 180 72.2
SEGI_31614 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 5.3e-68 263.1 180 72.2
BolC2t06732H Brassica oleracea HOM05D003829 ORTHO05D004943 5.9e-67 259.6 204 62.7
Haze_25313 Corylus avellana HOM05D003829 ORTHO05D004943 1.2e-64 251.9 174 74.1
Haze_18553 Corylus avellana HOM05D003829 ORTHO05D004943 2.7e-64 250.8 158 79.1
Duzib205G0197 Durio zibethinus HOM05D003829 ORTHO05D004943 8.2e-61 239.2 467 36.2
Migut.L00154 Erythranthe guttata HOM05D003829 ORTHO05D004943 3.1e-60 237.3 157 73.2
SEGI_27435 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 1.4e-57 228.4 142 74.6
Sp5g27630 Schrenkiella parvula HOM05D003829 ORTHO05D004943 1.6e-56 224.9 257 47.9
Eucgr.B00970 Eucalyptus grandis HOM05D003829 ORTHO05D004943 1.2e-51 208.8 121 80.2
Eucgr.E02529 Eucalyptus grandis HOM05D003829 ORTHO05D004943 2.0e-51 208.0 130 76.9
Oeu029991.1 Olea europaea HOM05D003829 ORTHO05D004943 7.7e-51 206.1 116 82.8
BraA03t10079Z Brassica rapa HOM05D000168 ORTHO05D000811 2.5e-49 201.1 120 75.0
A03p07510 Brassica napus HOM05D003829 ORTHO05D004943 4.2e-49 200.3 120 75.8
SEGI_39885 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 1.8e-47 194.9 120 75.8
C03p08720 Brassica napus HOM05D003829 ORTHO05D004943 4.4e-46 190.3 120 73.3
BolC3t13370H Brassica oleracea HOM05D000168 ORTHO05D000811 9.7e-46 189.1 120 72.5
HPP92_013186 Vanilla planifolia HOM05D003829 ORTHO05D004943 2.2e-42 177.9 184 52.7
Glyma.05G172902 Glycine max HOM05D003829 ORTHO05D004943 6.1e-40 169.9 145 64.8
Rhsim09G0090700 Rhododendron simsii HOM05D000822 ORTHO05D002021 7.0e-36 156.4 179 52.0
HanXRQChr05g0129701 Helianthus annuus HOM05D003829 ORTHO05D044979 8.5e-34 149.4 85 82.4
SEGI_23908 Sequoiadendron giganteum HOM05D003829 ORTHO05D004052 8.5e-34 149.4 231 42.0
MELO3C000039.2 Cucumis melo HOM05D003829 ORTHO05D004943 9.1e-28 129.4 75 77.3
Glyma.10G113400 Glycine max HOM05D003829 ORTHO05D028379 6.5e-26 123.2 149 48.3
CARHR202060 Cardamine hirsuta HOM05D003829 ORTHO05D116213 3.0e-23 114.4 66 78.8
Lsat_1_v5_gn_3_100941 Lactuca sativa HOM05D002028 ORTHO05D022527 3.0e-23 114.4 72 73.6
MELO3C029751.2 Cucumis melo HOM05D003829 ORTHO05D044979 4.4e-22 110.5 87 66.7
Hma1.2p1_0340F.1_g130220 Hydrangea macrophylla HOM05D003829 ORTHO05D004943 1.1e-20 105.9 131 47.3
TPR.G25992 Trifolium pratense HOM05D003829 ORTHO05D015515 4.1e-20 104.0 75 69.3
HPP92_012679 Vanilla planifolia HOM05D000282 ORTHO05D004791 6.6e-18 96.7 136 40.4
Nitab4.5_0000138g0100 Nicotiana tabacum HOM05D003829 ORTHO05D284283 2.4e-12 78.2 104 42.3
Haze_25315 Corylus avellana HOM05D003829 ORTHO05D004943 1.6e-11 75.5 60 61.7
Lsat_1_v5_gn_4_30320 Lactuca sativa HOM05D003829 ORTHO05D015515 4.3e-09 67.4 38 81.6
TAR374G1547 Trochodendron aralioides HOM05D003829 ORTHO05D004943 1.2e-08 65.9 31 93.5
Lsat_1_v5_gn_1_100681 Lactuca sativa HOM05D003829 ORTHO05D228871 7.5e-06 56.6 34 73.5


User provided reference genes

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