Gene: PGR083G2380

General Information

Structural Information

  • Species Punica granatum
  • Gene Identifier PGR083G2380
  • Transcript Identifier PGR083G2380.01
  • Gene Type Coding gene
  • Location NC_045133.1 : 10460764-10462991 : positive

Gene Family Information

  • ID HOM05D000282
  • #Genes/#Species 1541/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pid XP_031405002.1
  • name LOC116213967
  • name XM_031549142.1
  • id gene-LOC116213967
  • uniprot A0A2I0IDY2

Descriptions

  • product tubulin beta chain
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT4G20890
GO:0007017
IEA
GOA Databasemicrotubule-based process
GO:0007017
IEA
InterPromicrotubule-based process
GO:0007010
IEA
GOA Databasecytoskeleton organization

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005200
IEA
GOA Databasestructural constituent of cytoskeleton
GO:0005200
IEA
InterProstructural constituent of cytoskeleton
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G20010
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G20010
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0005525
IEA
GOA DatabaseGTP binding
GO:0005525
IEA
InterProGTP binding
GO:0003924
IEA
GOA DatabaseGTPase activity
GO:0003924
IEA
InterProGTPase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G20010
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT1G20010
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT5G44340
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G44340
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT1G20010
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT5G44340
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT4G20890
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT1G20010
GO:0005874
IEA
GOA Databasemicrotubule
GO:0005874
IEA
InterPromicrotubule
GO:0005856
IEA
GOA Databasecytoskeleton

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR008280 Tubulin/FtsZ, C-terminal
IPR002453 Beta tubulin
IPR018316 Tubulin/FtsZ, 2-layer sandwich domain
IPR000217 Tubulin
IPR036525 Tubulin/FtsZ, GTPase domain superfamily
IPR003008 Tubulin/FtsZ, GTPase domain
IPR023123 Tubulin, C-terminal
IPR037103 Tubulin/FtsZ-like, C-terminal domain
Mapman id Description
20.1.1.2 Cytoskeleton organisation.microtubular network.alpha-beta-Tubulin heterodimer.component beta-Tubulin