Gene: PGR044G2630
General Information
Structural Information
- Species Punica granatum
- Gene Identifier PGR044G2630
- Transcript Identifier PGR044G2630.01
- Gene Type Coding gene
- Location NC_045134.1 : 14749679-14761830 : positive
Gene Family Information
- ID HOM05D000446
- #Genes/#Species 1165/97
- Phylogenetic origin
- ID ORTHO05D000321
- #Genes/#Species 1120/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- pid XP_031373329.1
- name LOC116188246
- name XM_031517469.1
- id gene-LOC116188246
- uniprot A0A6P8BSI9
Descriptions
- product probable beta-D-xylosidase 7
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005975 | IEA | GOA Database | carbohydrate metabolic process | |
GO:0005975 | IEA | InterPro | carbohydrate metabolic process | |
GO:0045493 | IEA | GOA Database | xylan catabolic process | |
GO:0045493 | IEA | InterPro | xylan catabolic process | |
GO:0008152 | IEA | GOA Database | metabolic process |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0009044 | IEA | GOA Database | xylan 1,4-beta-xylosidase activity | |
GO:0009044 | IEA | InterPro | xylan 1,4-beta-xylosidase activity | |
GO:0004553 | IEA | GOA Database | hydrolase activity, hydrolyzing O-glycosyl compounds | |
GO:0004553 | IEA | InterPro | hydrolase activity, hydrolyzing O-glycosyl compounds | |
GO:0016787 | IEA | GOA Database | hydrolase activity | |
GO:0016798 | IEA | GOA Database | hydrolase activity, acting on glycosyl bonds |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0009505 | ISO | PLAZA Integrative Orthology | plant-type cell wall | AT1G78060 |
GO:0048046 | ISO | PLAZA Integrative Orthology | apoplast | AT1G78060 |
GO:0005618 | ISO | PLAZA Integrative Orthology | cell wall | AT1G78060 |
GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT1G78060 |
GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT1G78060 |
GO:0005576 | IEA | GOA Database | extracellular region |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR001764 | Glycoside hydrolase, family 3, N-terminal |
IPR026891 | Fibronectin type III-like domain |
IPR002772 | Glycoside hydrolase family 3 C-terminal domain |
IPR036881 | Glycoside hydrolase family 3 C-terminal domain superfamily |
IPR013783 | Immunoglobulin-like fold |
IPR044993 | Beta-D-xylosidase |
IPR036962 | Glycoside hydrolase, family 3, N-terminal domain superfamily |
IPR017853 | Glycoside hydrolase superfamily |
Mapman id | Description |
---|---|
21.3.2.2.4.2 | Cell wall organisation.pectin.rhamnogalacturonan I.modification and degradation.alpha-L-arabinofuranosidase activities.bifunctional alpha-L-arabinofuranosidase and beta-D-xylosidase (BXL) |