Gene: PGR044G2013
General Information
Structural Information
- Species Punica granatum
- Gene Identifier PGR044G2013
- Transcript Identifier PGR044G2013.01
- Gene Type Coding gene
- Location NC_045134.1 : 22404207-22409710 : negative
Gene Family Information
- ID HOM05D000880
- #Genes/#Species 677/100
- Phylogenetic origin
- ID ORTHO05D007053
- #Genes/#Species 135/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- pid XP_031407792.1
- name LOC116216017
- name XM_031551932.1
- id gene-LOC116216017
- uniprot A0A6P8EP68
Descriptions
- product gamma-tubulin complex component 4-like, transcript variant X1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009624 | ISO | PLAZA Integrative Orthology | response to nematode | AT3G53760 |
| GO:0043622 | ISO | PLAZA Integrative Orthology | cortical microtubule organization | AT3G53760 |
| GO:0000226 | IEA | GOA Database | microtubule cytoskeleton organization | |
| GO:0000226 | IEA | InterPro | microtubule cytoskeleton organization | |
| GO:0007020 | IEA | GOA Database | microtubule nucleation | |
| GO:0007020 | IEA | InterPro | microtubule nucleation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0043015 | IEA | GOA Database | gamma-tubulin binding | |
| GO:0043015 | IEA | InterPro | gamma-tubulin binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G53760 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005819 | ISO | PLAZA Integrative Orthology | spindle | AT3G53760 |
| GO:0045298 | ISO | PLAZA Integrative Orthology | tubulin complex | AT3G53760 |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT3G53760 |
| GO:0005815 | IEA | GOA Database | microtubule organizing center | |
| GO:0005815 | IEA | InterPro | microtubule organizing center | |
| GO:0000922 | IEA | GOA Database | spindle pole | |
| GO:0000922 | IEA | InterPro | spindle pole | |
| GO:0005737 | IEA | GOA Database | cytoplasm | |
| GO:0005874 | IEA | GOA Database | microtubule | |
| GO:0005856 | IEA | GOA Database | cytoskeleton |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 20.1.2.1.4 | Cytoskeleton organisation.microtubular network.microtubule Tubulin heterodimer formation.gamma-Tubulin Ring Complex (gamma-TuRC).component GCP4 |