Gene: AT3G53760

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G53760
  • Transcript Identifier AT3G53760.1
  • Gene Type Coding gene
  • Location Chr3 : 19918182-19922264 : negative

Gene Family Information

  • ID HOM05D000880
  • #Genes/#Species 677/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G53760.1
  • symbol GCP4
  • Alias ATGCP4
  • uniprot Q9M350

Descriptions

  • Description GAMMA-TUBULIN COMPLEX PROTEIN 4
  • Computational description GAMMA-TUBULIN COMPLEX PROTEIN 4 (GCP4); CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: spindle pole body component 98 (TAIR:AT5G06680.1); Has 1249 Blast hits to 1181 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 551; Fungi - 320; Plants - 155; Viruses - 0; Other Eukaryotes - 223 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051225
IBA
Gene Ontologyspindle assembly1
GO:0000278
IBA
Gene Ontologymitotic cell cycle1
GO:0051321
IBA
Gene Ontologymeiotic cell cycle1
GO:0000226
IEA
GOA Databasemicrotubule cytoskeleton organization
GO:0000226
IEA
InterPromicrotubule cytoskeleton organization
GO:0007020
IMP
IBA
IEA
Gene Ontologymicrotubule nucleation1 2
GO:0007020
IEA
InterPromicrotubule nucleation
GO:0031122
IBA
Gene Ontologycytoplasmic microtubule organization1
GO:0009624
IDA
Gene Ontologyresponse to nematode3
GO:0043622
IMP
Gene Ontologycortical microtubule organization2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043015
IBA
IEA
Gene Ontologygamma-tubulin binding1
GO:0043015
IEA
InterProgamma-tubulin binding
GO:0051011
IBA
Gene Ontologymicrotubule minus-end binding1
GO:0005515
IPI
Gene Ontologyprotein binding4

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005874
IEA
GOA Databasemicrotubule
GO:0000923
IBA
Gene Ontologyequatorial microtubule organizing center1
GO:0000930
IBA
Gene Ontologygamma-tubulin complex1
GO:0005856
IEA
GOA Databasecytoskeleton
GO:0005819
IEA
GOA Databasespindle
GO:0005819
IDA
Gene Ontologyspindle5
GO:0009506
IDA
GOA Databaseplasmodesma
GO:0009506
HDA
Gene Ontologyplasmodesma6
GO:0005737
IEA
GOA Databasecytoplasm
GO:0000922
IEA
Gene Ontologyspindle pole
GO:0000922
IEA
InterProspindle pole
GO:0005815
IEA
Gene Ontologymicrotubule organizing center
GO:0005815
IEA
InterPromicrotubule organizing center
GO:0005813
IBA
Gene Ontologycentrosome1
GO:0045298
IPI
Gene Ontologytubulin complex2
GO:0005739
ISM
Gene Ontologymitochondrion

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR042241 Gamma-tubulin complex, C-terminal domain superfamily
IPR041470 Gamma tubulin complex component protein, N-terminal
IPR007259 Gamma-tubulin complex component protein
IPR040457 Gamma tubulin complex component, C-terminal
Mapman id Description
20.1.2.1.4 Cytoskeleton organisation.microtubular network.microtubule Tubulin heterodimer formation.gamma-Tubulin Ring Complex (gamma-TuRC).component GCP4