Gene: PGR044G0642

General Information

Structural Information

Species Punica granatum
Gene Identifier PGR044G0642
Transcript Identifier PGR044G0642.01
Gene Type Coding gene
Location NC_045134.1 : 3585682-3595539 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000840
#Genes/#Species 710/97
Phylogenetic origin

ID ORTHO05D000670
#Genes/#Species 693/97
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

pid XP_031372639.1
name LOC116187825
name XM_031516779.1
id gene-LOC116187825
uniprot A0A6P8BQN2

Descriptions

Short descriptions
Ortholog descriptions

product mediator of RNA polymerase II transcription subunit 15a-like

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006355	IEA	GOA Database	regulation of transcription, DNA-templated
GO:0006355	IEA	InterPro	regulation of transcription, DNA-templated
GO:0045893	IEA	GOA Database	positive regulation of transcription, DNA-templated
GO:0009751	ISO	PLAZA Integrative Orthology	response to salicylic acid	AT1G15780
GO:0045723	ISO	PLAZA Integrative Orthology	positive regulation of fatty acid biosynthetic process	AT1G15780

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003712	IEA	GOA Database	transcription coregulator activity
GO:0003712	IEA	InterPro	transcription coregulator activity
GO:0003713	IEA	GOA Database	transcription coactivator activity
GO:0003713	IEA	InterPro	transcription coactivator activity
GO:0031490	IEA	GOA Database	chromatin DNA binding
GO:0031490	IEA	InterPro	chromatin DNA binding
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT2G10440

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	IEA	GOA Database	nucleus
GO:0016592	ISO	PLAZA Integrative Orthology	mediator complex	AT1G15780
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT1G15790

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR036546	Mediator complex subunit 15, KIX domain
IPR036529	Coactivator CBP, KIX domain superfamily
IPR044661	Mediator of RNA polymerase II transcription subunit 15a/b/c-like

Mapman id	Description
35.1	not assigned.annotated