Gene: AT2G10440

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G10440
  • Transcript Identifier AT2G10440.1
  • Gene Type Coding gene
  • Location Chr2 : 4013752-4018046 : negative

Gene Family Information

  • ID HOM05D000840
  • #Genes/#Species 710/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G10440.1
  • uniprot Q9SHV7

Descriptions

  • Description mediator of RNA polymerase II transcription subunit
  • Computational description unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15780.1); Has 8319 Blast hits to 5104 proteins in 317 species: Archae - 0; Bacteria - 285; Metazoa - 1706; Fungi - 535; Plants - 320; Viruses - 18; Other Eukaryotes - 5455 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045893
IEA
GOA Databasepositive regulation of transcription, DNA-templated
GO:0006355
ISO
PLAZA Homology (enrichment)regulation of transcription, DNA-templated HOM05D000840

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003713
IEA
Gene Ontologytranscription coactivator activity
GO:0003713
IEA
InterProtranscription coactivator activity
GO:0005515
IPI
Gene Ontologyprotein binding1
GO:0031490
IEA
GOA Databasechromatin DNA binding
GO:0031490
IDA
IBA
Gene Ontologychromatin DNA binding1 2
GO:0031490
IEA
InterProchromatin DNA binding
GO:0003712
ISO
PLAZA Homology (enrichment)transcription coregulator activity HOM05D000840

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036546 Mediator complex subunit 15, KIX domain
IPR044661 Mediator of RNA polymerase II transcription subunit 15a/b/c-like
Mapman id Description
15.3.4.4.3.5 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.MEDIATOR complex.tail module.component MED15