Gene: PGR004G2104
General Information
Structural Information
- Species Punica granatum
- Gene Identifier PGR004G2104
- Transcript Identifier PGR004G2104.01
- Gene Type Coding gene
- Location NC_045131.1 : 2681802-2682647 : negative
Gene Family Information
- ID HOM05D000479
- #Genes/#Species 1104/98
- Phylogenetic origin
- ID ORTHO05D001285
- #Genes/#Species 440/88
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- pid XP_031398937.1
- name LOC116209440
- name XM_031543077.1
- id gene-LOC116209440
- uniprot A0A6P8DNG3
Descriptions
- product probable CCR4-associated factor 1 homolog 11
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0090503 | IEA | GOA Database | RNA phosphodiester bond hydrolysis, exonucleolytic |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004535 | IEA | GOA Database | poly(A)-specific ribonuclease activity | |
| GO:0004535 | IEA | InterPro | poly(A)-specific ribonuclease activity | |
| GO:0003676 | IEA | GOA Database | nucleic acid binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030014 | IEA | GOA Database | CCR4-NOT complex | |
| GO:0030014 | IEA | InterPro | CCR4-NOT complex | |
| GO:0005737 | IEA | GOA Database | cytoplasm |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.4.2.1.2.2 | RNA processing.RNA surveillance.mRNA deadenylation-dependent decay.mRNA deadenylation.CCR4-NOT complex.deadenylase component CAF1 |