Gene: PGR004G1566
General Information
Structural Information
- Species Punica granatum
- Gene Identifier PGR004G1566
- Transcript Identifier PGR004G1566.01
- Gene Type Coding gene
- Location NC_045131.1 : 1268030-1273359 : positive
Gene Family Information
- ID HOM05D000422
- #Genes/#Species 1214/100
- Phylogenetic origin
- ID ORTHO05D002369
- #Genes/#Species 294/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- pid XP_031397045.1
- name LOC116208016
- name XM_031541185.1
- id gene-LOC116208016
- uniprot A0A6P8DLC8
Descriptions
- product chaperone protein ClpB3, chloroplastic
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009408 | IEA | GOA Database | response to heat | |
| GO:0009408 | IEA | InterPro | response to heat | |
| GO:0042026 | IEA | GOA Database | protein refolding | |
| GO:0042026 | IEA | InterPro | protein refolding | |
| GO:0009658 | ISO | PLAZA Integrative Orthology | chloroplast organization | AT5G15450 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0016887 | IEA | InterPro | ATP hydrolysis activity | |
| GO:0000166 | IEA | GOA Database | nucleotide binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | IEA | GOA Database | cytoplasm | |
| GO:0005737 | IEA | InterPro | cytoplasm | |
| GO:0009536 | IEA | GOA Database | plastid | |
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT5G15450 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT5G15450 |
| GO:0009532 | ISO | PLAZA Integrative Orthology | plastid stroma | AT5G15450 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR019489 | Clp ATPase, C-terminal |
| IPR003959 | ATPase, AAA-type, core |
| IPR036628 | Clp, N-terminal domain superfamily |
| IPR001270 | ClpA/B family |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR041546 | ClpA/ClpB, AAA lid domain |
| IPR004176 | Clp, repeat (R) domain |
| IPR017730 | Chaperonin ClpB |
| IPR003593 | AAA+ ATPase domain |
| Mapman id | Description |
|---|---|
| 26.4.2.4 | External stimuli response.temperature.heat response.organellar chaperone (Clp-p/Clp-m) |