Gene: Os12g0197500

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os12g0197500
  • Transcript Identifier Os12t0197500-01
  • Gene Type Coding gene
  • Location chr12 : 5035471-5040813 : negative

Gene Family Information

  • ID HOM05D002459
  • #Genes/#Species 276/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os12t0197500-01
  • MSU-ID LOC_Os12g09580.1
  • symbol OsSGS3
  • name suppressor of gene silencing 3
  • uniprot Q2QWE9

Descriptions

  • Description Similar to Protein SUPPRESSOR OF GENE SILENCING 3 homolog.
  • Description Homolog of Arabidopsis suppressor of gene silencing 3, Cofactor of RNA-dependent RNA polymerase, Defense response to virus
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0050688
IEA
GOA Databaseregulation of defense response to virus
GO:0031047
IEA
GOA Databasegene silencing by RNA
GO:0031047
IEA
InterProgene silencing by RNA
GO:0051607
IEA
GOA Databasedefense response to virus
GO:0051607
IEA
InterProdefense response to virus
GO:0009616
ISO
PLAZA Integrative OrthologyRNAi-mediated antiviral immune response AT5G23570
GO:0010050
ISO
PLAZA Integrative Orthologyvegetative phase change AT5G23570
GO:0010267
ISO
PLAZA Integrative Orthologyproduction of ta-siRNAs involved in RNA interference AT5G23570
GO:0010025
ISO
PLAZA Integrative Orthologywax biosynthetic process AT5G23570

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G23570
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT5G23570

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005380 XS domain
IPR038588 XS domain superfamily
IPR044287 Protein SUPPRESSOR OF GENE SILENCING 3
IPR005381 Zinc finger-XS domain
Mapman id Description
12.5.1.3 Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.stabilization factor (SGS3)