Gene: Os08g0344100

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os08g0344100
  • Transcript Identifier Os08t0344100-01
  • Gene Type Coding gene
  • Location chr08 : 15554211-15558737 : positive

Gene Family Information

  • ID HOM05D001141
  • #Genes/#Species 542/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os08t0344100-01
  • MSU-ID LOC_Os08g25570.1
  • symbol HDA705
  • name histone deacetylase 705
  • uniprot Q6ZB59

Descriptions

  • Description Histone deacetylase, Regulation of seed germination, Response to ABA and abiotic stresses
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1900055
ISO
PLAZA Integrative Orthologyregulation of leaf senescence AT3G44680
GO:1990619
ISO
PLAZA Integrative Orthologyhistone H3-K9 deacetylation AT3G44680
GO:0010431
ISO
PLAZA Integrative Orthologyseed maturation AT5G63110
GO:0010228
ISO
PLAZA Integrative Orthologyvegetative to reproductive phase transition of meristem AT5G63110
GO:0016441
ISO
PLAZA Integrative Orthologyposttranscriptional gene silencing AT5G63110
GO:0048510
ISO
PLAZA Integrative Orthologyregulation of timing of transition from vegetative to reproductive phase AT5G63110
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT5G63110
GO:0009845
ISO
PLAZA Integrative Orthologyseed germination AT5G35600
GO:0009553
ISO
PLAZA Integrative Orthologyembryo sac development AT5G35600
GO:0070932
IEA
GOA Databasehistone H3 deacetylation
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT5G63110
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT5G63110
GO:0010187
ISO
PLAZA Integrative Orthologynegative regulation of seed germination AT3G44680
GO:0016458
ISO
PLAZA Integrative Orthologygene silencing AT5G63110
GO:0016575
IEA
GOA Databasehistone deacetylation
GO:0016575
IEA
InterProhistone deacetylation
GO:0006325
IEA
GOA Databasechromatin organization

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G63110
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT3G44680
GO:0004407
IEA
GOA Databasehistone deacetylase activity
GO:0004407
IEA
InterProhistone deacetylase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0032041
IEA
GOA DatabaseNAD-dependent histone deacetylase activity (H3-K14 specific)

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G44680
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT3G44680
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT5G63110
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003084 Histone deacetylase
IPR023801 Histone deacetylase domain
IPR000286 Histone deacetylase family
IPR023696 Ureohydrolase domain superfamily
IPR037138 Histone deacetylase domain superfamily
Mapman id Description
12.3.2.1.1.2.1 Chromatin organisation.post-translational histone modification.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase activities.SNL-HDA19 histone deacetylase complex.deacetylase component HDA19
12.3.2.1.1.3 Chromatin organisation.post-translational histone modification.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase activities.histone deacetylase (HDA8)