Gene: Os07g0685000
General Information
Structural Information
- Species Oryza sativa ssp. japonica
- Gene Identifier Os07g0685000
- Transcript Identifier Os07t0685000-02
- Gene Type Coding gene
- Location chr07 : 29077557-29081108 : negative
Gene Family Information
- ID HOM05D000715
- #Genes/#Species 808/100
- Phylogenetic origin
- ID ORTHO05D000024
- #Genes/#Species 3751/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Os07t0685000-02
- MSU-ID LOC_Os07g48570.1
- symbol OsCDF3
- symbol RDD2
- name CYCLING DOF FACTOR 3
- name rice Dof daily fluctuations 2
- uniprot Q84PD2
Descriptions
- Description Dof transcription factor
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0048577 | ISO | PLAZA Integrative Orthology | negative regulation of short-day photoperiodism, flowering | AT1G69570 |
| GO:0009658 | ISO | PLAZA Integrative Orthology | chloroplast organization | AT5G62430 |
| GO:0010228 | ISO | PLAZA Integrative Orthology | vegetative to reproductive phase transition of meristem | AT5G62430 |
| GO:0048579 | ISO | PLAZA Integrative Orthology | negative regulation of long-day photoperiodism, flowering | AT1G69570 |
| GO:1902455 | ISO | PLAZA Integrative Orthology | negative regulation of stem cell population maintenance | AT2G34140 |
| GO:0048510 | ISO | PLAZA Integrative Orthology | regulation of timing of transition from vegetative to reproductive phase | AT5G39660 |
| GO:0045892 | ISO | PLAZA Integrative Orthology | negative regulation of transcription, DNA-templated | AT2G34140 |
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0001227 | ISO | PLAZA Integrative Orthology | DNA-binding transcription repressor activity, RNA polymerase II-specific | AT5G62430 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT2G34140 |
| GO:0000978 | ISO | PLAZA Integrative Orthology | RNA polymerase II cis-regulatory region sequence-specific DNA binding | AT5G62430 |
| GO:0003677 | IBA IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G39660 |
| GO:0003700 | IBA | GOA Database | DNA-binding transcription factor activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR003851 | Zinc finger, Dof-type |
| Mapman id | Description |
|---|---|
| 15.5.1.5 | RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.transcription factor (DOF) |