Gene: AT2G34140
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G34140
- Transcript Identifier AT2G34140.1
- Gene Type Coding gene
- Location Chr2 : 14414188-14414700 : negative
Gene Family Information
- ID HOM05D000715
- #Genes/#Species 808/100
- Phylogenetic origin
- ID ORTHO05D000024
- #Genes/#Species 3751/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT2G34140.1
- uniprot O22967
Descriptions
- Description Dof-type zinc finger DNA-binding family protein
- Computational description Dof-type zinc finger DNA-binding family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root, flower, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT1G29160.1); Has 1074 Blast hits to 1069 proteins in 56 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1069; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0045892 | IDA | Gene Ontology | negative regulation of transcription, DNA-templated | 1 |
GO:1902455 | IMP | Gene Ontology | negative regulation of stem cell population maintenance | 1 |
GO:0009908 | IEA | GOA Database | flower development | |
GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003700 | ISS | Gene Ontology | DNA-binding transcription factor activity | 2 |
GO:0000976 | IPI | Gene Ontology | transcription cis-regulatory region binding | 3 |
GO:0046872 | IEA | GOA Database | metal ion binding | |
GO:0003677 | IEA | GOA Database | DNA binding | |
GO:0003677 | IEA | InterPro | DNA binding | |
GO:0008270 | ISO | PLAZA Integrative Orthology | zinc ion binding | Zm00001eb033670 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | IEA | GOA Database | nucleus | |
GO:0005634 | ISM | Gene Ontology | nucleus |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR003851 | Zinc finger, Dof-type |
Mapman id | Description |
---|---|
15.5.1.5 | RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.transcription factor (DOF) |