Gene: Os04g0683500
General Information
Structural Information
- Species Oryza sativa ssp. japonica
- Gene Identifier Os04g0683500
- Transcript Identifier Os04t0683500-02
- Gene Type Coding gene
- Location chr04 : 34893003-34894934 : positive
Gene Family Information
- ID HOM05D005745
- #Genes/#Species 135/94
- Phylogenetic origin
- ID ORTHO05D006857
- #Genes/#Species 137/94
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Os04t0683500-02
- MSU-ID LOC_Os04g58690.3
- MSU-ID LOC_Os04g58690.2
- MSU-ID LOC_Os04g58690.1
- MSU-ID LOC_Os04g58690.6
- MSU-ID LOC_Os04g58690.5
- MSU-ID LOC_Os04g58690.4
- uniprot Q7XPV6
Descriptions
- Description Similar to H0306F12.5 protein.
- Description Similar to Adenosine deaminase acting on tRNA 1.
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006396 | IBA IEA | GOA Database | RNA processing | |
| GO:0006396 | IEA | InterPro | RNA processing | |
| GO:0006382 | IBA | GOA Database | adenosine to inosine editing | |
| GO:0006400 | ISO | PLAZA Integrative Orthology | tRNA modification | AT1G01760 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004000 | IEA | GOA Database | adenosine deaminase activity | |
| GO:0004000 | IEA | InterPro | adenosine deaminase activity | |
| GO:0003723 | IEA | GOA Database | RNA binding | |
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0003726 | IBA | GOA Database | double-stranded RNA adenosine deaminase activity | |
| GO:0003725 | IBA | GOA Database | double-stranded RNA binding | |
| GO:0008251 | IBA | GOA Database | tRNA-specific adenosine deaminase activity | |
| GO:0042803 | ISO | PLAZA Integrative Orthology | protein homodimerization activity | AT1G01760 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005730 | IBA | GOA Database | nucleolus | |
| GO:0005737 | IBA | GOA Database | cytoplasm | |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT1G01760 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR002466 | Adenosine deaminase/editase |
| Mapman id | Description |
|---|---|
| 16.5.1.1 | RNA processing.RNA modification.adenosine deamination.tRNA adenosine deaminase (TAD1) |