Gene: Os04g0610800
General Information
Structural Information
- Species Oryza sativa ssp. japonica
- Gene Identifier Os04g0610800
- Transcript Identifier Os04t0610800-02
- Gene Type Coding gene
- Location chr04 : 30961763-30965164 : positive
Gene Family Information
- ID HOM05D000161
- #Genes/#Species 2285/100
- Phylogenetic origin
- ID ORTHO05D005857
- #Genes/#Species 151/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Os04t0610800-02
- MSU-ID LOC_Os04g52130.1
- symbol RLIN1
- symbol LLM1
- name rice lesion initiation 1
- name leaf lesion mimic mutant 1
- uniprot Q7XPL2
Descriptions
- Description Putative coproporphyrinogen III oxidase, Lesion initiation, Resistance to bacterial blight pathogens
- Description Similar to Coproporphyrinogen III oxidase (Fragment).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0033014 | ISO | PLAZA Integrative Orthology | tetrapyrrole biosynthetic process | AT1G03475 |
| GO:0006355 | ISO | PLAZA Homology (enrichment) | regulation of transcription, DNA-templated | HOM05D000161 |
| GO:0006779 | IEA | GOA Database | porphyrin-containing compound biosynthetic process | |
| GO:0006779 | IEA | InterPro | porphyrin-containing compound biosynthetic process | |
| GO:0006782 | IBA IEA | GOA Database | protoporphyrinogen IX biosynthetic process | |
| GO:0015995 | IEA | GOA Database | chlorophyll biosynthetic process | |
| GO:0006783 | IEA | GOA Database | heme biosynthetic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003690 | ISO | PLAZA Homology (enrichment) | double-stranded DNA binding | HOM05D000161 |
| GO:0004109 | IBA IEA | GOA Database | coproporphyrinogen oxidase activity | |
| GO:0004109 | IEA | InterPro | coproporphyrinogen oxidase activity | |
| GO:0042803 | ISS | GOA Database | protein homodimerization activity | |
| GO:0016491 | IEA | GOA Database | oxidoreductase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | IBA | GOA Database | chloroplast stroma | |
| GO:0048046 | ISO | PLAZA Integrative Orthology | apoplast | AT1G03475 |
| GO:0005737 | IBA | GOA Database | cytoplasm | |
| GO:0009536 | IEA | GOA Database | plastid | |
| GO:0009507 | IEA | GOA Database | chloroplast |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 7.12.4.2.1 | Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.coproporphyrinogen III oxidase activities.oxygen-dependent coproporphyrinogen III oxidase (HemF) |