Gene: Os03g0258500

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os03g0258500
  • Transcript Identifier Os03t0258500-01
  • Gene Type Coding gene
  • Location chr03 : 8369347-8370978 : positive

Gene Family Information

  • ID HOM05D004730
  • #Genes/#Species 155/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os03t0258500-01
  • MSU-ID LOC_Os03g15290.1
  • symbol OsATG6b
  • symbol OsATG6c
  • symbol ATG6C
  • name autophagy 6c
  • uniprot Q10NU3

Descriptions

  • Description ATG6/Beclin-1 protein, Abiotic stresses (heat, cold and drought) and hormone (abscisic acid) response
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006914
IEA
GOA Databaseautophagy
GO:0006914
IEA
InterProautophagy
GO:0045324
IBA
GOA Databaselate endosome to vacuole transport
GO:0006995
IBA
GOA Databasecellular response to nitrogen starvation
GO:0000045
IBA
GOA Databaseautophagosome assembly
GO:0009846
ISO
PLAZA Integrative Orthologypollen germination AT3G61710
GO:0050832
ISO
PLAZA Integrative Orthologydefense response to fungus AT3G61710
GO:0006623
ISO
PLAZA Integrative Orthologyprotein targeting to vacuole AT3G61710

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G61710

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0034272
IBA
GOA Databasephosphatidylinositol 3-kinase complex, class III, type II
GO:0034271
IBA
GOA Databasephosphatidylinositol 3-kinase complex, class III, type I
GO:0000407
IBA
GOA Databasephagophore assembly site

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR040455 Atg6, BARA domain
IPR007243 Atg6/Beclin
IPR041691 Atg6/beclin, coiled-coil domain
IPR038274 Atg6/Beclin C-terminal domain superfamily
Mapman id Description
19.3.2.2 Protein homeostasis.autophagy.nucleation complexes.regulatory component VPS30/ATG6