Gene: Os02g0294700

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os02g0294700
  • Transcript Identifier Os02t0294700-01
  • Gene Type Coding gene
  • Location chr02 : 11209876-11211942 : negative

Gene Family Information

  • ID HOM05D001696
  • #Genes/#Species 382/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os02t0294700-01
  • MSU-ID LOC_Os02g19220.2
  • MSU-ID LOC_Os02g19220.1
  • uniprot Q6K5C7

Descriptions

  • Description Topoisomerase II-associated protein PAT1 domain containing protein.
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000290
IEA
GOA Databasedeadenylation-dependent decapping of nuclear-transcribed mRNA
GO:0000290
IEA
InterProdeadenylation-dependent decapping of nuclear-transcribed mRNA
GO:0019827
ISO
PLAZA Integrative Orthologystem cell population maintenance AT3G22270
GO:0045087
ISO
PLAZA Integrative Orthologyinnate immune response AT1G79090

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G22270
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G79090

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G22270
GO:0000932
ISO
PLAZA Integrative OrthologyP-body AT1G79090
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT3G22270

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR039900 Pat1-like
IPR019167 mRNA decay factor PAT1 domain
Mapman id Description
16.4.2.5 RNA processing.RNA surveillance.mRNA deadenylation-dependent decay.mRNA decay factor (PAT1)