Gene: Nitab4.5_0012292g0010
General Information
Structural Information
- Species Nicotiana tabacum
- Gene Identifier Nitab4.5_0012292g0010
- Transcript Identifier Nitab4.5_0012292g0010.1
- Gene Type Coding gene
- Location Nitab4.5_0012292 : 20317-27059 : positive
Gene Family Information
- ID HOM05D001910
- #Genes/#Species 344/98
- Phylogenetic origin
- ID ORTHO05D003653
- #Genes/#Species 211/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Nitab4.5_0012292g0010.1
- SR1-identifier Nta08g09260.1
Descriptions
- Description mRNA splicing factor, thioredoxin-like U5 snRNP, Thioredoxin-like fold
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000398 | IEA | InterPro | mRNA splicing, via spliceosome |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G08290 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046540 | IEA | InterPro | U4/U6 x U5 tri-snRNP complex | |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G08290 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT5G08290 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.2.1.4.1 | RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U5 small nuclear ribonucleoprotein particle (snRNP).protein factor (U5-15kDa/YLS8) |