Gene: Nitab4.5_0011211g0020
General Information
Structural Information
- Species Nicotiana tabacum
- Gene Identifier Nitab4.5_0011211g0020
- Transcript Identifier Nitab4.5_0011211g0020.1
- Gene Type Coding gene
- Location Nitab4.5_0011211 : 34355-35193 : positive
Gene Family Information
- ID HOM05D000216
- #Genes/#Species 1874/88
- Phylogenetic origin
- ID ORTHO05D000634
- #Genes/#Species 723/78
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Nitab4.5_0011211g0020.1
Descriptions
- Description RNA polymerase Rpb1, domain 1, RNA polymerase, N-terminal, RNA polymerase, alpha subunit, RNA polymerase Rpb1, domain 3
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006351 | IEA | InterPro | transcription, DNA-templated | |
GO:0006354 | ISO | PLAZA Integrative Orthology | DNA-templated transcription, elongation | ATCG00180 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003677 | IEA | InterPro | DNA binding | |
GO:0003899 | IEA | InterPro | DNA-directed 5'-3' RNA polymerase activity | |
GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | ATCG00180 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | ATCG00180 |
GO:0042644 | ISO | PLAZA Integrative Orthology | chloroplast nucleoid | ATCG00180 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
15.6.1.2.1.3 | RNA biosynthesis.organelle machinery.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.core components.core component RpoC1 |