Gene: Nitab4.5_0009179g0010

General Information

Structural Information

  • Species Nicotiana tabacum
  • Gene Identifier Nitab4.5_0009179g0010
  • Transcript Identifier Nitab4.5_0009179g0010.1
  • Gene Type Coding gene
  • Location Nitab4.5_0009179 : 67077-70893 : negative

Gene Family Information

  • ID HOM05D005300
  • #Genes/#Species 143/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Nitab4.5_0009179g0010.1
  • SR1-identifier Nta17g21090.1

Descriptions

  • Description PDZ domain, Peptidase M50, putative membrane-associated zinc metallopeptidase, Peptidase M50
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006508
IEA
InterProproteolysis
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT1G05140
GO:0009658
ISO
PLAZA Integrative Orthologychloroplast organization AT2G32480

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0004222
IEA
InterPrometalloendopeptidase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
InterProintegral component of membrane
GO:0009706
ISO
PLAZA Integrative Orthologychloroplast inner membrane AT2G32480
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT2G32480

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR041489 PDZ domain 6
IPR036034 PDZ superfamily
IPR008915 Peptidase M50
IPR001478 PDZ domain
IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase
Mapman id Description
18.11.3.2 Protein modification.targeting peptide maturation.plastid.plastidial inner envelope protease (AraSP)