Gene: AT1G05140

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G05140
  • Transcript Identifier AT1G05140.1
  • Gene Type Coding gene
  • Location Chr1 : 1482681-1484006 : positive

Gene Family Information

  • ID HOM05D005300
  • #Genes/#Species 143/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G05140.1
  • uniprot O23053

Descriptions

  • Description Peptidase M50 family protein
  • Computational description Peptidase M50 family protein; FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M50 (InterPro:IPR008915), PDZ/DHR/GLGF (InterPro:IPR001478), Peptidase M50, putative membrane-associated zinc metallopeptidase (InterPro:IPR004387); BEST Arabidopsis thaliana protein match is: ARABIDOPSIS SERIN PROTEASE (TAIR:AT2G32480.1); Has 10190 Blast hits to 7652 proteins in 2240 species: Archae - 41; Bacteria - 6892; Metazoa - 13; Fungi - 4; Plants - 72; Viruses - 0; Other Eukaryotes - 3168 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006508
IEA
GOA Databaseproteolysis
GO:0006508
IEA
InterProproteolysis
GO:0009409
IMP
Gene Ontologyresponse to cold1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008237
IEA
GOA Databasemetallopeptidase activity
GO:0005515
IEA
InterProprotein binding
GO:0004222
IEA
Gene Ontologymetalloendopeptidase activity
GO:0004222
IEA
InterPrometalloendopeptidase activity
GO:0008233
IEA
GOA Databasepeptidase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016021
IEA
InterProintegral component of membrane
GO:0009528
IEA
GOA Databaseplastid inner membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0009507
IDA
IEA
GOA Databasechloroplast
GO:0009507
HDA
ISM
Gene Ontologychloroplast2
GO:0009536
IEA
GOA Databaseplastid
GO:0009706
IEA
GOA Databasechloroplast inner membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR008915 Peptidase M50
IPR001478 PDZ domain
IPR036034 PDZ superfamily
IPR041489 PDZ domain 6
IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase
Mapman id Description
18.11.3.2 Protein modification.targeting peptide maturation.plastid.plastidial inner envelope protease (AraSP)