Gene: Nitab4.5_0005254g0010

General Information

Structural Information

  • Species Nicotiana tabacum
  • Gene Identifier Nitab4.5_0005254g0010
  • Transcript Identifier Nitab4.5_0005254g0010.1
  • Gene Type Coding gene
  • Location Nitab4.5_0005254 : 137142-173584 : negative

Gene Family Information

  • ID HOM05D003944
  • #Genes/#Species 177/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Nitab4.5_0005254g0010.1
  • SR1-identifier Nta24g09040.1

Descriptions

  • Description Ribosomal protein S5 domain 2-type fold, subgroup, Histidine kinase-like ATPase, ATP-binding domain, DNA gyrase, subunit B, DNA topoisomerase, type IIA, conserved site, DNA topoisomerase, type IIA, central domain, Ribosomal protein S5 domain 2-type fold, DNA gyrase B subunit, C-terminal, DNA topoisomerase, type IIA-like domain, DNA topoisomerase, type IIA, subunit B, DNA topoisomerase, type IIA, subunit B, domain 2, DNA topoisomerase, type IIA, Toprim domain
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006265
IEA
InterProDNA topological change

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003918
IEA
InterProDNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
GO:0005524
IEA
InterProATP binding
GO:0003916
ISO
PLAZA Integrative OrthologyDNA topoisomerase activity AT5G04130
GO:0034335
ISO
PLAZA Integrative OrthologyDNA negative supercoiling activity AT5G04130

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005694
IEA
InterProchromosome
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G10270
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT3G10270
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT3G10270

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003594 Histidine kinase/HSP90-like ATPase
IPR000565 DNA topoisomerase, type IIA, subunit B
IPR011557 DNA gyrase, subunit B
IPR036890 Histidine kinase/HSP90-like ATPase superfamily
IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal
IPR001241 DNA topoisomerase, type IIA
IPR013760 DNA topoisomerase, type IIA-like domain superfamily
IPR020568 Ribosomal protein S5 domain 2-type fold
IPR006171 TOPRIM domain
IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2
IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup
IPR002288 DNA gyrase B subunit, C-terminal
Mapman id Description
13.5.3.2 Cell cycle organisation.organellar DNA replication.DNA gyrase complex.subunit B