Gene: Nitab4.5_0004892g0030

General Information

Structural Information

  • Species Nicotiana tabacum
  • Gene Identifier Nitab4.5_0004892g0030
  • Transcript Identifier Nitab4.5_0004892g0030.1
  • Gene Type Coding gene
  • Location Nitab4.5_0004892 : 1082-15410 : negative

Gene Family Information

  • ID HOM05D006744
  • #Genes/#Species 119/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Nitab4.5_0004892g0030.1
  • SR1-identifier Nta03g02320.1

Descriptions

  • Description Pentatricopeptide repeat, NAD(P)-binding domain, Tetratricopeptide-like helical
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007623
ISO
PLAZA Integrative Orthologycircadian rhythm AT3G46780

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009508
ISO
PLAZA Integrative Orthologyplastid chromosome AT3G46780
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G46780
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT3G46780
GO:0009534
ISO
PLAZA Integrative Orthologychloroplast thylakoid AT3G46780
GO:0098572
ISO
PLAZA Integrative Orthologystromal side of plastid thylakoid membrane AT3G46780
GO:0042644
ISO
PLAZA Integrative Orthologychloroplast nucleoid AT3G46780
GO:0009535
ISO
PLAZA Integrative Orthologychloroplast thylakoid membrane AT3G46780

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR002885 Pentatricopeptide repeat
IPR016040 NAD(P)-binding domain
Mapman id Description
15.6.1.2.3.6 RNA biosynthesis.organelle machinery.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factor components.component TAC16