Gene: AT3G46780

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G46780
  • Transcript Identifier AT3G46780.1
  • Gene Type Coding gene
  • Location Chr3 : 17228766-17231021 : positive

Gene Family Information

  • ID HOM05D006744
  • #Genes/#Species 119/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G46780.1
  • symbol PTAC16
  • uniprot Q9STF2

Descriptions

  • Description plastid transcriptionally active 16
  • Computational description plastid transcriptionally active 16 (PTAC16); FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: in 6 components; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G18890.1); Has 1243 Blast hits to 1093 proteins in 359 species: Archae - 5; Bacteria - 555; Metazoa - 73; Fungi - 75; Plants - 168; Viruses - 22; Other Eukaryotes - 345 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007623
IEP
Gene Ontologycircadian rhythm1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
HDA
Gene Ontologycytosol3
GO:0009579
IEA
GOA Databasethylakoid
GO:0016020
IEA
GOA Databasemembrane
GO:0009507
IDA
IEA
GOA Databasechloroplast
GO:0009507
HDA
ISM
Gene Ontologychloroplast4
GO:0009536
IEA
GOA Databaseplastid
GO:0009534
IDA
GOA Databasechloroplast thylakoid
GO:0009534
HDA
Gene Ontologychloroplast thylakoid5
GO:0009508
IDA
GOA Databaseplastid chromosome
GO:0009941
IDA
GOA Databasechloroplast envelope
GO:0009941
HDA
Gene Ontologychloroplast envelope6
GO:0009535
IEA
GOA Databasechloroplast thylakoid membrane
GO:0009535
IDA, HDA
Gene Ontologychloroplast thylakoid membrane2 7
GO:0042644
IEA
GOA Databasechloroplast nucleoid
GO:0042644
IDA, HDA
Gene Ontologychloroplast nucleoid8 9
GO:0098572
IDA
Gene Ontologystromal side of plastid thylakoid membrane9

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016040 NAD(P)-binding domain
IPR036291 NAD(P)-binding domain superfamily
Mapman id Description
15.6.1.2.3.6 RNA biosynthesis.organelle machinery.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factor components.component TAC16