Gene: Nitab4.5_0003463g0090
General Information
Structural Information
- Species Nicotiana tabacum
- Gene Identifier Nitab4.5_0003463g0090
- Transcript Identifier Nitab4.5_0003463g0090.1
- Gene Type Coding gene
- Location Nitab4.5_0003463 : 137465-147648 : positive
Gene Family Information
- ID HOM05D000467
- #Genes/#Species 1130/96
- Phylogenetic origin
- ID ORTHO05D000379
- #Genes/#Species 1028/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Nitab4.5_0003463g0090.1
- SR1-identifier Nta05g30630.1
Descriptions
- Description WD40 repeat, CTLH, C-terminal LisH motif, Quinonprotein alcohol dehydrogenase-like superfamily, Topless family, WD40-repeat-containing domain, WD40/YVTN repeat-like-containing domain, WD40 repeat, conserved site, Cytochrome cd1-nitrite reductase-like, haem d1 domain
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0010051 | ISO | PLAZA Integrative Orthology | xylem and phloem pattern formation | AT1G15750 |
| GO:0010072 | ISO | PLAZA Integrative Orthology | primary shoot apical meristem specification | AT1G80490 |
| GO:0009867 | ISO | PLAZA Integrative Orthology | jasmonic acid mediated signaling pathway | AT1G15750 |
| GO:1903507 | ISO | PLAZA Integrative Orthology | negative regulation of nucleic acid-templated transcription | AT3G15880 |
| GO:0009733 | ISO | PLAZA Integrative Orthology | response to auxin | AT1G15750 |
| GO:0009938 | ISO | PLAZA Integrative Orthology | negative regulation of gibberellic acid mediated signaling pathway | AT3G15880 |
| GO:0045892 | ISO | PLAZA Integrative Orthology | negative regulation of transcription, DNA-templated | AT1G15750 |
| GO:0010336 | ISO | PLAZA Integrative Orthology | gibberellic acid homeostasis | AT3G15880 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0042802 | ISO | PLAZA Integrative Orthology | identical protein binding | AT1G15750 |
| GO:0042803 | ISO | PLAZA Integrative Orthology | protein homodimerization activity | AT1G15750 |
| GO:0003714 | ISO | PLAZA Integrative Orthology | transcription corepressor activity | AT3G15880 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT1G15750 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G80490 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR011047 | Quinoprotein alcohol dehydrogenase-like superfamily |
| IPR011048 | Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily |
| IPR006595 | CTLH, C-terminal LisH motif |
| IPR027728 | Topless family |
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily |
| IPR001680 | WD40 repeat |