Gene: Nitab4.5_0003079g0060
General Information
Structural Information
- Species Nicotiana tabacum
- Gene Identifier Nitab4.5_0003079g0060
- Transcript Identifier Nitab4.5_0003079g0060.1
- Gene Type Coding gene
- Location Nitab4.5_0003079 : 63052-72010 : negative
Gene Family Information
- ID HOM05D002340
- #Genes/#Species 290/99
- Phylogenetic origin
- ID ORTHO05D003624
- #Genes/#Species 212/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Nitab4.5_0003079g0060.1
- SR1-identifier Nta11g29150.2
Descriptions
- Description Arginyl tRNA synthetase N-terminal domain, Rossmann-like alpha/beta/alpha sandwich fold, Aminoacyl-tRNA synthetase, class I, conserved site, Aminoacyl-tRNA synthetase, class 1a, anticodon-binding, Arginyl-tRNA synthetase, class Ia, core, Arginine-tRNA ligase, class Ia, DALR anticodon binding
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Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006420 | IEA | InterPro | arginyl-tRNA aminoacylation | |
| GO:0006418 | IEA | InterPro | tRNA aminoacylation for protein translation | |
| GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT4G26300 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000166 | IEA | InterPro | nucleotide binding | |
| GO:0004814 | IEA | InterPro | arginine-tRNA ligase activity | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0004812 | IEA | InterPro | aminoacyl-tRNA ligase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | IEA | InterPro | cytoplasm | |
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT4G26300 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT4G26300 |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT4G26300 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036695 | Arginyl tRNA synthetase N-terminal domain superfamily |
| IPR009080 | Aminoacyl-tRNA synthetase, class Ia, anticodon-binding |
| IPR001278 | Arginine-tRNA ligase |
| IPR008909 | DALR anticodon binding |
| IPR005148 | Arginyl tRNA synthetase N-terminal domain |
| IPR035684 | Arginyl-tRNA synthetase, catalytic core domain |
| IPR014729 | Rossmann-like alpha/beta/alpha sandwich fold |
| Mapman id | Description |
|---|---|
| 17.2.2 | Protein biosynthesis.aminoacyl-tRNA synthetase activities.arginine-tRNA ligase |