Gene: MSTRG.5500
General Information
Structural Information
- Species Avicennia marina
- Gene Identifier MSTRG.5500
- Transcript Identifier MSTRG.5500.1
- Gene Type Coding gene
- Location ScioBoG_102839_HRSCAF_103093 : 330092-334448 : negative
Gene Family Information
- ID HOM05D005727
- #Genes/#Species 135/96
- Phylogenetic origin
- ID ORTHO05D007324
- #Genes/#Species 132/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
Descriptions
- tid MSTRG.5500.1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0043043 | IEA | InterPro | peptide biosynthetic process | |
| GO:0006414 | IEA | InterPro | translational elongation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003746 | IEA | InterPro | translation elongation factor activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | IEA | InterPro | cytoplasm | |
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT3G08740 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT3G08740 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR014722 | Ribosomal protein L2, domain 2 |
| IPR008991 | Translation protein SH3-like domain superfamily |
| IPR015365 | Elongation factor P, C-terminal |
| IPR011768 | Translation elongation factor P |
| IPR013185 | Translation elongation factor, KOW-like |
| IPR012340 | Nucleic acid-binding, OB-fold |
| IPR020599 | Translation elongation factor P/YeiP |
| IPR001059 | Translation elongation factor P/YeiP, central |
| Mapman id | Description |
|---|---|
| 17.7.4.4 | Protein biosynthesis.organelle machinery.translation elongation.elongation factor (EF-P) |