Gene: MSTRG.24964

General Information

Structural Information

Species Avicennia marina
Gene Identifier MSTRG.24964
Transcript Identifier MSTRG.24964.1
Gene Type Coding gene
Location ScioBoG_4119_HRSCAF_4138 : 1538130-1541745 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000446
#Genes/#Species 1165/97
Phylogenetic origin

ID ORTHO05D000321
#Genes/#Species 1120/97
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

Descriptions

Short descriptions
Ortholog descriptions

tid MSTRG.24964.1

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005975	IEA	InterPro	carbohydrate metabolic process
GO:0045493	IEA	InterPro	xylan catabolic process

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0004553	IEA	InterPro	hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0009044	IEA	InterPro	xylan 1,4-beta-xylosidase activity

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009507	ISO	PLAZA Integrative Orthology	chloroplast	AT1G78060
GO:0009506	ISO	PLAZA Integrative Orthology	plasmodesma	AT1G78060
GO:0005618	ISO	PLAZA Integrative Orthology	cell wall	AT1G78060
GO:0048046	ISO	PLAZA Integrative Orthology	apoplast	AT1G78060
GO:0009505	ISO	PLAZA Integrative Orthology	plant-type cell wall	AT1G78060

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR026891	Fibronectin type III-like domain
IPR002772	Glycoside hydrolase family 3 C-terminal domain
IPR001764	Glycoside hydrolase, family 3, N-terminal
IPR017853	Glycoside hydrolase superfamily
IPR036962	Glycoside hydrolase, family 3, N-terminal domain superfamily
IPR013783	Immunoglobulin-like fold
IPR044993	Beta-D-xylosidase
IPR036881	Glycoside hydrolase family 3 C-terminal domain superfamily

Mapman id	Description
21.3.2.2.4.2	Cell wall organisation.pectin.rhamnogalacturonan I.modification and degradation.alpha-L-arabinofuranosidase activities.bifunctional alpha-L-arabinofuranosidase and beta-D-xylosidase (BXL)