Gene: MSTRG.11275
General Information
Structural Information
- Species Avicennia marina
- Gene Identifier MSTRG.11275
- Transcript Identifier MSTRG.11275.1
- Gene Type Coding gene
- Location ScioBoG_14204_HRSCAF_14270 : 4937397-4951951 : positive
Gene Family Information
- ID HOM05D000789
- #Genes/#Species 750/100
- Phylogenetic origin
- ID ORTHO05D000897
- #Genes/#Species 565/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
Descriptions
- tid MSTRG.11275.1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:2000306 | ISO | PLAZA Integrative Orthology | positive regulation of photomorphogenesis | AT3G48590 |
| GO:0010029 | ISO | PLAZA Integrative Orthology | regulation of seed germination | AT1G08970 |
| GO:0048574 | ISO | PLAZA Integrative Orthology | long-day photoperiodism, flowering | AT1G54830 |
| GO:0045893 | ISO | PLAZA Integrative Orthology | positive regulation of transcription, DNA-templated | AT3G48590 |
| GO:0009738 | ISO | PLAZA Integrative Orthology | abscisic acid-activated signaling pathway | AT1G08970 |
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | Solyc06g072040.1 |
| GO:0009740 | ISO | PLAZA Integrative Orthology | gibberellic acid mediated signaling pathway | AT1G08970 |
| GO:0048579 | ISO | PLAZA Integrative Orthology | negative regulation of long-day photoperiodism, flowering | Os03g0251350 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003712 | ISO | PLAZA Integrative Orthology | transcription coregulator activity | AT1G54830 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G48590 |
| GO:0046982 | IEA | InterPro | protein heterodimerization activity | |
| GO:0043565 | ISO | PLAZA Integrative Orthology | sequence-specific DNA binding | AT1G08970 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT1G08970 |
| GO:0003677 | IEA | InterPro | DNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G08970 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT1G08970 |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G48590 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.49.3 | RNA biosynthesis.transcriptional regulation.NF-Y transcription factor complex.component NF-YC |