Gene: Lsat_1_v5_gn_9_58540

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_9_58540
  • Transcript Identifier Lsat_1_v5_gn_9_58540.2
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_9 : 72565397-72567417 : negative

Gene Family Information

  • ID HOM05D002787
  • #Genes/#Species 248/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_9_58540.v5
  • pacid 38923130

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006418
IEA
InterProtRNA aminoacylation for protein translation
GO:0090305
ISO
PLAZA Integrative Orthologynucleic acid phosphodiester bond hydrolysis AT3G56170
GO:0006308
ISO
PLAZA Integrative OrthologyDNA catabolic process AT2G40410
GO:0006401
ISO
PLAZA Integrative OrthologyRNA catabolic process AT2G40410

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000166
IEA
InterPronucleotide binding
GO:0004812
IEA
InterProaminoacyl-tRNA ligase activity
GO:0005524
IEA
InterProATP binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G56170
GO:0004518
ISO
PLAZA Integrative Orthologynuclease activity AT3G56170
GO:0004520
ISO
PLAZA Integrative Orthologyendodeoxyribonuclease activity AT2G40410
GO:0004521
ISO
PLAZA Integrative Orthologyendoribonuclease activity AT2G40410

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016071 Staphylococcal nuclease (SNase-like), OB-fold
IPR035437 SNase-like, OB-fold superfamily
IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding
Mapman id Description
35.1 not assigned.annotated