Gene: Lsat_1_v5_gn_9_117881

General Information

Structural Information

Species Lactuca sativa
Gene Identifier Lsat_1_v5_gn_9_117881
Transcript Identifier Lsat_1_v5_gn_9_117881.1
Gene Type Coding gene
Location Lsat_1_v8_lg_9 : 190793519-190796308 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000446
#Genes/#Species 1165/97
Phylogenetic origin

ID ORTHO05D000321
#Genes/#Species 1120/97
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

id Lsat_1_v5_gn_9_117881.v5
pacid 38927696

Descriptions

Short descriptions
Ortholog descriptions

Description 3.2.1.37//3.2.1.55 - Xylan 1,4-beta-xylosidase / Xylobiase // Non-reducing end alpha-L-arabinofuranosidase / Arabinosidase

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005975	IEA	InterPro	carbohydrate metabolic process
GO:0045493	IEA	InterPro	xylan catabolic process

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0004553	IEA	InterPro	hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0009044	IEA	InterPro	xylan 1,4-beta-xylosidase activity

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR001764	Glycoside hydrolase, family 3, N-terminal
IPR036962	Glycoside hydrolase, family 3, N-terminal domain superfamily
IPR026891	Fibronectin type III-like domain
IPR002772	Glycoside hydrolase family 3 C-terminal domain
IPR013783	Immunoglobulin-like fold
IPR036881	Glycoside hydrolase family 3 C-terminal domain superfamily
IPR017853	Glycoside hydrolase superfamily
IPR044993	Beta-D-xylosidase

Mapman id	Description
21.3.2.2.4.2	Cell wall organisation.pectin.rhamnogalacturonan I.modification and degradation.alpha-L-arabinofuranosidase activities.bifunctional alpha-L-arabinofuranosidase and beta-D-xylosidase (BXL)