Gene: Lsat_1_v5_gn_8_77820

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_8_77820
  • Transcript Identifier Lsat_1_v5_gn_8_77820.2
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_8 : 111415253-111416814 : negative

Gene Family Information

  • ID HOM05D000368
  • #Genes/#Species 1307/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_8_77820.v5
  • pacid 38950148

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030042
IEA
InterProactin filament depolymerization
GO:0007015
ISO
PLAZA Integrative Orthologyactin filament organization AT3G46010
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT5G59880
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT5G59890
GO:0006979
ISO
PLAZA Integrative Orthologyresponse to oxidative stress AT5G59880
GO:0002758
ISO
PLAZA Integrative Orthologyinnate immune response-activating signal transduction AT5G59890

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003779
IEA
InterProactin binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G46010

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015629
IEA
InterProactin cytoskeleton
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT3G46000
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G46000
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G59880
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT5G59880
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT3G46000
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT5G59880
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G59880

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR017904 ADF/Cofilin
IPR029006 ADF-H/Gelsolin-like domain superfamily
IPR002108 Actin-depolymerising factor homology domain
Mapman id Description
20.2.2.8 Cytoskeleton organisation.microfilament network.actin polymerisation.actin-depolymerizing factor (ADF)