Gene: Lsat_1_v5_gn_6_52280

General Information

Structural Information

Species Lactuca sativa
Gene Identifier Lsat_1_v5_gn_6_52280
Transcript Identifier Lsat_1_v5_gn_6_52280.1
Gene Type Coding gene
Location Lsat_1_v8_lg_6 : 73422552-73432216 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000667
#Genes/#Species 855/96
Phylogenetic origin

ID ORTHO05D002614
#Genes/#Species 275/95
Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

id Lsat_1_v5_gn_6_52280.v5
pacid 38941346

Descriptions

Short descriptions
Ortholog descriptions

Description PF00270//PF00271//PF01344 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Kelch motif (Kelch_1)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:2000762	ISO	PLAZA Integrative Orthology	regulation of phenylpropanoid metabolic process	AT1G55270

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0005524	IEA	InterPro	ATP binding
GO:0003724	IEA	InterPro	RNA helicase activity

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR015915	Kelch-type beta propeller
IPR006652	Kelch repeat type 1
IPR001650	Helicase, C-terminal
IPR036047	F-box-like domain superfamily
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR001810	F-box domain
IPR011545	DEAD/DEAH box helicase domain
IPR014001	Helicase superfamily 1/2, ATP-binding domain
IPR044763	Ded1/Dbp1, DEAD-box helicase domain

Mapman id	Description
9.2.1.1.3	Secondary metabolism.phenolics.p-coumaroyl-CoA biosynthesis.phenylalanine ammonia lyase activity.substrate adaptor of regulatory SCF ubiquitin ligase (SAGL1)