Gene: AT1G55270

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G55270
  • Transcript Identifier AT1G55270.1
  • Gene Type Coding gene
  • Location Chr1 : 20618333-20619925 : negative

Gene Family Information

  • ID HOM05D000667
  • #Genes/#Species 855/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G55270.1
  • uniprot Q93W93

Descriptions

  • Description Galactose oxidase/kelch repeat superfamily protein
  • Computational description Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G67480.2); Has 9614 Blast hits to 5501 proteins in 487 species: Archae - 10; Bacteria - 408; Metazoa - 7370; Fungi - 10; Plants - 1320; Viruses - 170; Other Eukaryotes - 326 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:2000762
IMP
Gene Ontologyregulation of phenylpropanoid metabolic process1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding1
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006652 Kelch repeat type 1
IPR001810 F-box domain
IPR015915 Kelch-type beta propeller
IPR036047 F-box-like domain superfamily
Mapman id Description
9.2.1.1.3 Secondary metabolism.phenolics.p-coumaroyl-CoA biosynthesis.phenylalanine ammonia lyase activity.substrate adaptor of regulatory SCF ubiquitin ligase (SAGL1)