Gene: Lsat_1_v5_gn_5_32220

General Information

Structural Information

Species Lactuca sativa
Gene Identifier Lsat_1_v5_gn_5_32220
Transcript Identifier Lsat_1_v5_gn_5_32220.1
Gene Type Coding gene
Location Lsat_1_v8_lg_5 : 68225299-68238788 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000746
#Genes/#Species 780/99
Phylogenetic origin

ID ORTHO05D000573
#Genes/#Species 771/99
Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

id Lsat_1_v5_gn_5_32220.v5
pacid 38964020

Descriptions

Short descriptions
Ortholog descriptions

Description PF00955//PF02779//PF02780//PF13292 - HCO3- transporter family (HCO3_cotransp) // Transketolase, pyrimidine binding domain (Transket_pyr) // Transketolase, C-terminal domain (Transketolase_C) // 1-deoxy-D-xylulose-5-phosphate synthase (DXP_synthase_N)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006820	IEA	InterPro	anion transport
GO:0016114	IEA	InterPro	terpenoid biosynthetic process
GO:0080029	ISO	PLAZA Integrative Orthology	cellular response to boron-containing substance levels	AT1G15460
GO:0035445	ISO	PLAZA Integrative Orthology	borate transmembrane transport	AT1G15460
GO:0046713	ISO	PLAZA Integrative Orthology	borate transport	AT1G15460

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003824	IEA	InterPro	catalytic activity
GO:0005452	IEA	InterPro	inorganic anion exchanger activity
GO:0008661	IEA	InterPro	1-deoxy-D-xylulose-5-phosphate synthase activity
GO:0080139	ISO	PLAZA Integrative Orthology	borate efflux transmembrane transporter activity	AT1G15460

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0016020	IEA	InterPro	membrane
GO:0016021	IEA	InterPro	integral component of membrane
GO:0005886	ISO	PLAZA Integrative Orthology	plasma membrane	AT1G15460

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR029061	Thiamin diphosphate-binding fold
IPR009014	Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II
IPR003020	Bicarbonate transporter, eukaryotic
IPR005475	Transketolase-like, pyrimidine-binding domain
IPR011531	Bicarbonate transporter, C-terminal
IPR033248	Transketolase, C-terminal domain
IPR005477	Deoxyxylulose-5-phosphate synthase

Mapman id	Description
24.2.3.6	Solute transport.carrier-mediated transport.APC superfamily.borate transporter (BOR)
9.1.2.2	Secondary metabolism.terpenoids.methylerythritol phosphate (MEP) pathway.1-deoxy-D-xylulose 5-phosphate synthase (DXS)